RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 IFNL3Q8IZI9 196 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 HERVK_113Q902F9 699 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 GMCL1Q96IK5 515 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 TRERF1Q96PN7 1200 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 FSD1Q9BTV5 496 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 PRDM12Q9H4Q4 367 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 ADD3Q9UEY8 706 aaKnown RBP10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 PNMA2Q9UL42 364 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 STX8Q9UNK0 236 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 SLC4A7Q9Y6M7 1214 aa10.81□□□□□ -0.68
AC055716.3-201ENST00000547533 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 DYNC1LI2O43237 492 aaPredicted RBP10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 CD4P01730 458 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 NKX3-2P78367 333 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 BEX3Q00994 111 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 RASIP1Q5U651 963 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 CXCL17Q6UXB2 119 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 FAM133AQ8N9E0 248 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 OSBP2Q969R2 916 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 POLR3EQ9NVU0 708 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 RCAN3Q9UKA8 241 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 TTC41PQ6P2S7 1318 aa10.8□□□□□ -0.68
AC055716.3-201ENST00000547533 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 GTPBP6O43824 516 aaPredicted RBP10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 PLA2G6O60733 806 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 CHGBP05060 677 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 PBX2P40425 430 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 CPT1AP50416 773 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 CNTN2Q02246 1040 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 PPARAQ07869 468 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 CCDC96Q2M329 555 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 PPP2R2DQ66LE6 453 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 RCSD1Q6JBY9 416 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 KIAA1211Q6ZU35 1233 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 ASB2Q96Q27 587 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 A1CFQ9NQ94 594 aaKnown RBP10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 CCPG1Q9ULG6 757 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 NCOR1O75376 2440 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 CDH23Q9H251 3354 aa10.79□□□□□ -0.68
AC055716.3-201ENST00000547533 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 LRRC37A2A6NM11 1700 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 GRXCR1A8MXD5 290 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 M0R2C6 588 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 MCCP23508 829 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 CCDC85BQ15834 202 aaPredicted RBP10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 NSMFQ6X4W1 530 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 C16orf59Q7L2K0 433 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 USP38Q8NB14 1042 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 SLC43A3Q8NBI5 491 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 RETREG2Q8NC44 543 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 UHRF1Q96T88 793 aaPredicted RBP10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 EPB41L4AQ9HCS5 686 aaPredicted RBP10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 GNEQ9Y223 722 aaKnown RBP10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 NOD1Q9Y239 953 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
AC055716.3-201ENST00000547533 VCANP13611 3396 aa10.77□□□□□ -0.68
AC055716.3-201ENST00000547533 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 ADCY6O43306 1168 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 KPNA6O60684 536 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 ICAM1P05362 532 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 ATP2A2P16615 1042 aaKnown RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 SMPD1P17405 629 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 COL9A1P20849 921 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 RFC2P35250 354 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 CCL23P55773 120 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 SKIV2LQ15477 1246 aaKnown RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 DIEXFQ68CQ4 756 aaKnown RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 KCTD1Q719H9 257 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 EEPD1Q7L9B9 569 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 FBXO16Q8IX29 292 aaPredicted RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 MIER1Q8N108 512 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 CCDC155Q8N6L0 562 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 FGD4Q96M96 766 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 KATNBL1Q9H079 304 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 DCTPP1Q9H773 170 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 TOMM22Q9NS69 142 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 MTMR7Q9Y216 660 aa10.77□□□□□ -0.69
AC055716.3-201ENST00000547533 PTPDC1A2A3K4 754 aa10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 SOWAHBA6NEL2 793 aa10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 NKRFO15226 690 aaKnown RBP eCLIP10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 B4GALT4O60513 344 aa10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 IRX5P78411 483 aaPredicted RBP10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 PDE4DQ08499 809 aa10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 DUSP28Q4G0W2 176 aa10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 FAM47CQ5HY64 1035 aa10.76□□□□□ -0.69
AC055716.3-201ENST00000547533 TMEM67Q5HYA8 995 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms