RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 MTMR8Q96EF0 704 aa11.96□□□□□ -0.49
LINC02409-201ENST00000547515 FGD4Q96M96 766 aa11.96□□□□□ -0.49
LINC02409-201ENST00000547515 DEFB118Q96PH6 123 aa11.96□□□□□ -0.49
LINC02409-201ENST00000547515 USP26Q9BXU7 913 aa11.96□□□□□ -0.49
LINC02409-201ENST00000547515 JMJD4Q9H9V9 463 aa11.96□□□□□ -0.49
LINC02409-201ENST00000547515 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
LINC02409-201ENST00000547515 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
LINC02409-201ENST00000547515 CYBAP13498 195 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 SLC35G1Q2M3R5 365 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 FAM133AQ8N9E0 248 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 TRPV1Q8NER1 839 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 CLEC4DQ8WXI8 215 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 LRRC2Q9BYS8 371 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
LINC02409-201ENST00000547515 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 CCDC69A6NI79 296 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
LINC02409-201ENST00000547515 SMARCA1P28370 1054 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 QRICH1Q2TAL8 776 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 NUP133Q8WUM0 1156 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 TCEANC2Q96MN5 208 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 MAF1Q9H063 256 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 VAT1LQ9HCJ6 419 aa11.94□□□□□ -0.5
LINC02409-201ENST00000547515 ABCB11O95342 1321 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 TNRC18O15417 2968 aaPredicted RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 NFIBO00712 420 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 ZBTB5O15062 677 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 CYTH3O43739 400 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 MSCO60682 206 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 CALM1P0DP23 149 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 CALM2P0DP24 149 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 CALM3P0DP25 149 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 KIF5BP33176 963 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 GNAQP50148 359 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 USH1GQ495M9 461 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 PRAMEF19Q5SWL8 479 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 LHX8Q68G74 356 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 NSMFQ6X4W1 530 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 UBE2Q1Q7Z7E8 422 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 FBXO11Q86XK2 927 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 ANKLE1Q8NAG6 615 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 OGDHLQ9ULD0 1010 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 SLC12A7Q9Y666 1083 aa11.93□□□□□ -0.5
LINC02409-201ENST00000547515 MKI67P46013 3256 aaKnown RBP11.93□□□□□ -0.5
LINC02409-201ENST00000547515 ASTN1O14525 1302 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 SEPT4O43236 478 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 PSMA5P28066 241 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 BAATQ14032 418 aaPredicted RBP11.92□□□□□ -0.5
LINC02409-201ENST00000547515 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 FBXL16Q8N461 479 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
LINC02409-201ENST00000547515 LOC102724159A0A0B4J2E5 919 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 EIF5BO60841 1220 aaKnown RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 PPP1R11O60927 126 aaPredicted RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 ZNF865P0CJ78 1059 aaPredicted RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 CPA1P15085 419 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 RXRAP19793 462 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 RPS6KB1P23443 525 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 CNGA1P29973 690 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 RCAN1P53805 252 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 GHRHRQ02643 423 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 TRAF1Q13077 416 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 PWP2Q15269 919 aaKnown RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 SLC30A10Q6XR72 485 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 ARMCX2Q7L311 632 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 FANCBQ8NB91 859 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 MORC4Q8TE76 937 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 PIGSQ96S52 555 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 AGXT2Q9BYV1 514 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 TM6SF1Q9BZW5 370 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
LINC02409-201ENST00000547515 MRPL11Q9Y3B7 192 aaKnown RBP11.91□□□□□ -0.5
LINC02409-201ENST00000547515 PNMA6FA0A0J9YX94 578 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 PTPDC1A2A3K4 754 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 ASB14A6NK59 587 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 PLEKHA8P1O95397 391 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms