RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CLK2P49760 499 aaKnown RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 STX17P56962 302 aa21.03■□□□□ 0.96
VDR-204ENST00000547065 TBX2Q13207 712 aaPredicted RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 SEPT2Q15019 361 aa21.03■□□□□ 0.96
VDR-204ENST00000547065 CDKAL1Q5VV42 579 aa21.03■□□□□ 0.96
VDR-204ENST00000547065 RSBN1LQ6PCB5 846 aaPredicted RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 SIAH1Q8IUQ4 282 aa21.03■□□□□ 0.96
VDR-204ENST00000547065 SMYD4Q8IYR2 804 aaPredicted RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 CCAR2Q8N163 923 aaKnown RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 CTAGE1Q96RT6 745 aa21.03■□□□□ 0.96
VDR-204ENST00000547065 COL2A1P02458 1487 aaPredicted RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 ZNF646O15015 1829 aaPredicted RBP21.03■□□□□ 0.96
VDR-204ENST00000547065 A0A1B0GTH6 734 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 DYNC1I1O14576 645 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 TECP42680 631 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 ICA1Q05084 483 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 CALCRLQ16602 461 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 IGSF22Q8N9C0 903 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 C16orf45Q96MC5 204 aaPredicted RBP21.02■□□□□ 0.96
VDR-204ENST00000547065 VPS33BQ9H267 617 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 PSTPIP2Q9H939 334 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 BAG6P46379 1132 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.96
VDR-204ENST00000547065 SF3B2Q13435 895 aaKnown RBP21.02■□□□□ 0.96
VDR-204ENST00000547065 RBM26Q5T8P6 1007 aaKnown RBP21.02■□□□□ 0.96
VDR-204ENST00000547065 SPECC1LQ69YQ0 1117 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 PPP4R3AQ6IN85 833 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 GMCL1P1Q8NEA9 526 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 TMX1Q9H3N1 280 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 TMOD2Q9NZR1 351 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 CTNND2Q9UQB3 1225 aa21.02■□□□□ 0.96
VDR-204ENST00000547065 VIL1P09327 827 aaKnown RBP21.01■□□□□ 0.95
VDR-204ENST00000547065 PLCG1P19174 1290 aa21.01■□□□□ 0.95
VDR-204ENST00000547065 PAK1Q13153 545 aa21.01■□□□□ 0.95
VDR-204ENST00000547065 PDIA5Q14554 519 aa21.01■□□□□ 0.95
VDR-204ENST00000547065 TMEM266Q2M3C6 531 aa21.01■□□□□ 0.95
VDR-204ENST00000547065 SLC16A10Q8TF71 515 aa21.01■□□□□ 0.95
VDR-204ENST00000547065 NAP1L4Q99733 375 aaKnown RBP21.01■□□□□ 0.95
VDR-204ENST00000547065 GTPBP4Q9BZE4 634 aaKnown RBP21.01■□□□□ 0.95
VDR-204ENST00000547065 HDAC9Q9UKV0 1011 aa21.01■□□□□ 0.95
VDR-204ENST00000547065 PSDA5PKW4 1024 aaPredicted RBP21■□□□□ 0.95
VDR-204ENST00000547065 EDIL3O43854 480 aa21■□□□□ 0.95
VDR-204ENST00000547065 TXKP42681 527 aa21■□□□□ 0.95
VDR-204ENST00000547065 TNNI2P48788 182 aa21■□□□□ 0.95
VDR-204ENST00000547065 SHROOM1Q2M3G4 852 aaPredicted RBP21■□□□□ 0.95
VDR-204ENST00000547065 FILIP1LQ4L180 1135 aa21■□□□□ 0.95
VDR-204ENST00000547065 APTXQ7Z2E3 356 aaKnown RBP21■□□□□ 0.95
VDR-204ENST00000547065 CALML4Q96GE6 196 aa21■□□□□ 0.95
VDR-204ENST00000547065 GMCL1Q96IK5 515 aa21■□□□□ 0.95
VDR-204ENST00000547065 PLIN2Q99541 437 aa21■□□□□ 0.95
VDR-204ENST00000547065 RAB34Q9BZG1 259 aa21■□□□□ 0.95
VDR-204ENST00000547065 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
VDR-204ENST00000547065 PAXBP1Q9Y5B6 917 aa21■□□□□ 0.95
VDR-204ENST00000547065 SIPA1L1O43166 1804 aa21■□□□□ 0.95
VDR-204ENST00000547065 F5H6K3 240 aa21■□□□□ 0.95
VDR-204ENST00000547065 RAD21O60216 631 aa21■□□□□ 0.95
VDR-204ENST00000547065 GTF2F1P35269 517 aaKnown RBP eCLIP21■□□□□ 0.95
VDR-204ENST00000547065 AMPD3Q01432 767 aa21■□□□□ 0.95
VDR-204ENST00000547065 KLRC3Q07444 240 aa21■□□□□ 0.95
VDR-204ENST00000547065 PTPN14Q15678 1187 aa21■□□□□ 0.95
VDR-204ENST00000547065 QRICH1Q2TAL8 776 aa21■□□□□ 0.95
VDR-204ENST00000547065 LARGE2Q8N3Y3 721 aa21■□□□□ 0.95
VDR-204ENST00000547065 NELFBQ8WX92 580 aa21■□□□□ 0.95
VDR-204ENST00000547065 CCDC47Q96A33 483 aaKnown RBP21■□□□□ 0.95
VDR-204ENST00000547065 GMLQ99445 158 aa21■□□□□ 0.95
VDR-204ENST00000547065 C7orf25Q9BPX7 421 aa21■□□□□ 0.95
VDR-204ENST00000547065 HERC5Q9UII4 1024 aaKnown RBP21■□□□□ 0.95
VDR-204ENST00000547065 SYNPO2Q9UMS6 1093 aa21■□□□□ 0.95
VDR-204ENST00000547065 SPDYE2BA6NHP3 402 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 USP27XA6NNY8 438 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 KLRC4O43908 158 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 RHOBTB3O94955 611 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 GDF11O95390 407 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 SPDYE6P0CI01 402 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 GCFC2P16383 781 aaKnown RBP20.99■□□□□ 0.95
VDR-204ENST00000547065 SPAG1Q07617 926 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 UBE2SQ16763 222 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 KMT5BQ4FZB7 885 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 NYAP1Q6ZVC0 841 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 ADSSL1Q8N142 457 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 CSRNP1Q96S65 589 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 MMTAG2Q9BU76 263 aaKnown RBP20.99■□□□□ 0.95
VDR-204ENST00000547065 LRWD1Q9UFC0 647 aa20.99■□□□□ 0.95
VDR-204ENST00000547065 ATF5Q9Y2D1 282 aaPredicted RBP20.99■□□□□ 0.95
VDR-204ENST00000547065 LRRC10BA6NIK2 292 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 KIF2AO00139 706 aaPredicted RBP20.98■□□□□ 0.95
VDR-204ENST00000547065 CCP110O43303 1012 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 TDP2O95551 362 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 DPEP1P16444 411 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 KCNA3P22001 575 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 PRCPP42785 496 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 STIM1Q13586 685 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 DLGAP5Q15398 846 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 CEP135Q66GS9 1140 aa20.98■□□□□ 0.95
VDR-204ENST00000547065 E4F1Q66K89 784 aaPredicted RBP20.98■□□□□ 0.95
VDR-204ENST00000547065 TRMT1Q9NXH9 659 aaKnown RBP20.98■□□□□ 0.95
VDR-204ENST00000547065 ADD3Q9UEY8 706 aaKnown RBP20.98■□□□□ 0.95
VDR-204ENST00000547065 LIMA1Q9UHB6 759 aaKnown RBP20.98■□□□□ 0.95
VDR-204ENST00000547065 PCDHA1Q9Y5I3 950 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms