RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ADCY7P51828 1080 aa13.57□□□□□ -0.24
CCDC38-202ENST00000546386 NONOQ15233 471 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC38-202ENST00000546386 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
CCDC38-202ENST00000546386 CCDC39Q9UFE4 941 aa13.57□□□□□ -0.24
CCDC38-202ENST00000546386 CNOT7Q9UIV1 285 aaKnown RBP13.57□□□□□ -0.24
CCDC38-202ENST00000546386 ZNF541Q9H0D2 1346 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 DPYDQ12882 1025 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 NCAPHQ15003 741 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 CCDC178Q5BJE1 867 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 NBPF12Q5TAG4 269 aaPredicted RBP13.56□□□□□ -0.24
CCDC38-202ENST00000546386 CPXCR1Q8N123 301 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 NAP1L5Q96NT1 182 aaPredicted RBP13.56□□□□□ -0.24
CCDC38-202ENST00000546386 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 GDAQ9Y2T3 454 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 MYH8P13535 1937 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 ZBTB5O15062 677 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 MARCH6O60337 910 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 INPP5BP32019 993 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 STAT3P40763 770 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
CCDC38-202ENST00000546386 GPIHBP1Q8IV16 184 aa13.56□□□□□ -0.24
CCDC38-202ENST00000546386 MKI67P46013 3256 aaKnown RBP13.55□□□□□ -0.24
CCDC38-202ENST00000546386 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 NEMFO60524 1076 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 CFBP00751 764 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 UBA7P41226 1012 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 STAT6P42226 847 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 PTGER2P43116 358 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 DNTTIP2Q5QJE6 756 aaKnown RBP13.55□□□□□ -0.24
CCDC38-202ENST00000546386 TMEM179Q6ZVK1 233 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 SLC16A10Q8TF71 515 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 PKD2L1Q9P0L9 805 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 SERPINC1P01008 464 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 GNA11P29992 359 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
CCDC38-202ENST00000546386 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 CACTINQ8WUQ7 758 aaKnown RBP13.55□□□□□ -0.24
CCDC38-202ENST00000546386 FEZ1Q99689 392 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 HACL1Q9UJ83 578 aa13.55□□□□□ -0.24
CCDC38-202ENST00000546386 MYO1BO43795 1136 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 SSBP05455 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC38-202ENST00000546386 EPS15P42566 896 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 PLA2G4DQ86XP0 818 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 UPF1Q92900 1129 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC38-202ENST00000546386 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
CCDC38-202ENST00000546386 ZNF341Q9BYN7 854 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 NAT10Q9H0A0 1025 aaKnown RBP13.54□□□□□ -0.24
CCDC38-202ENST00000546386 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 ZBTB21Q9ULJ3 1066 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 LAMA3Q16787 3333 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 BMP3P12645 472 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 NAALADL2Q58DX5 795 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
CCDC38-202ENST00000546386 TRIM49BA6NDI0 452 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 DDNO94850 711 aaPredicted RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 SLFN14P0C7P3 912 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 PLCG1P19174 1290 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 NOVP48745 357 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 TGFB2P61812 414 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 HDLBPQ00341 1268 aaKnown RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 ECM1Q16610 540 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 FAM151AQ8WW52 585 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 DEFB129Q9H1M3 183 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 EHD4Q9H223 541 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 CALCRLQ16602 461 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 PRR16Q569H4 304 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 ANGEL2Q5VTE6 544 aaKnown RBP13.53□□□□□ -0.24
CCDC38-202ENST00000546386 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 LZTS2Q9BRK4 669 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 PRR12Q9ULL5 1215 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
CCDC38-202ENST00000546386 OR52Z1P0C646 297 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 RRAGBQ5VZM2 374 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 KCNK18Q7Z418 384 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 CPLX3Q8WVH0 158 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 TBC1D7Q9P0N9 293 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 CTNND2Q9UQB3 1225 aa13.52□□□□□ -0.24
CCDC38-202ENST00000546386 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.24
CCDC38-202ENST00000546386 MEIS1O00470 390 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC38-202ENST00000546386 SORBS3O60504 671 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms