RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ADORA2AP29274 412 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 MAP2K5Q13163 448 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 MUM1L1Q5H9M0 696 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 FBXO11Q86XK2 927 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 CCDC82Q8N4S0 544 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 TPCN1Q9ULQ1 816 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 PLXNA1Q9UIW2 1896 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 PNMA6FA0A0J9YX94 578 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 USH1GQ495M9 461 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 RAET1EQ8TD07 263 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 CNTNAP5Q8WYK1 1306 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 RGS2P41220 211 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 CCT2P78371 535 aaKnown RBP23.74■■□□□ 1.39
HMGA2-211ENST00000545998 KCTD2Q14681 263 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 RABEP1Q15276 862 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 CLEC4DQ8WXI8 215 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 PIBF1Q8WXW3 757 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 RRP36Q96EU6 259 aaKnown RBP23.74■■□□□ 1.39
HMGA2-211ENST00000545998 AMNQ9BXJ7 453 aa23.74■■□□□ 1.39
HMGA2-211ENST00000545998 ABCB11O95342 1321 aa23.73■■□□□ 1.39
HMGA2-211ENST00000545998 HOXC6P09630 235 aa23.73■■□□□ 1.39
HMGA2-211ENST00000545998 XRCC5P13010 732 aaKnown RBP23.73■■□□□ 1.39
HMGA2-211ENST00000545998 NCOA5Q9HCD5 579 aaKnown RBP23.73■■□□□ 1.39
HMGA2-211ENST00000545998 COBLO75128 1261 aa23.72■■□□□ 1.39
HMGA2-211ENST00000545998 CYP2B6P20813 491 aa23.72■■□□□ 1.39
HMGA2-211ENST00000545998 ANKRD35Q8N283 1001 aa23.72■■□□□ 1.39
HMGA2-211ENST00000545998 APBA2Q99767 749 aa23.72■■□□□ 1.39
HMGA2-211ENST00000545998 A1CFQ9NQ94 594 aaKnown RBP23.72■■□□□ 1.39
HMGA2-211ENST00000545998 RBBP6Q7Z6E9 1792 aaKnown RBP23.72■■□□□ 1.39
HMGA2-211ENST00000545998 NFIBO00712 420 aa23.71■■□□□ 1.39
HMGA2-211ENST00000545998 PGK2P07205 417 aa23.71■■□□□ 1.39
HMGA2-211ENST00000545998 STK3Q13188 491 aa23.71■■□□□ 1.39
HMGA2-211ENST00000545998 NTRK3Q16288 839 aa23.71■■□□□ 1.39
HMGA2-211ENST00000545998 DPP9Q86TI2 863 aa23.71■■□□□ 1.39
HMGA2-211ENST00000545998 SEC63Q9UGP8 760 aaKnown RBP23.71■■□□□ 1.39
HMGA2-211ENST00000545998 LCTP09848 1927 aa23.7■■□□□ 1.39
HMGA2-211ENST00000545998 DNAJC25-GNG10A0A024R161 153 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 ADCY3O60266 1144 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 PFKFB2O60825 505 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 NOL8Q76FK4 1167 aaKnown RBP23.7■■□□□ 1.38
HMGA2-211ENST00000545998 NPLOC4Q8TAT6 608 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 PXYLP1Q8TE99 480 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 PCDHA1Q9Y5I3 950 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 PFASO15067 1338 aa23.7■■□□□ 1.38
HMGA2-211ENST00000545998 hCG_1642624A0A1W2PR95 340 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 TRAF1Q13077 416 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 SLAIN1Q8ND83 568 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 DDX11Q96FC9 970 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 SLKQ9H2G2 1235 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-211ENST00000545998 CYP39A1Q9NYL5 469 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 MRPL11Q9Y3B7 192 aaKnown RBP23.69■■□□□ 1.38
HMGA2-211ENST00000545998 ELNP15502 786 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 IFNAR1P17181 557 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 GRK4P32298 578 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 SCRN1Q12765 414 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 ME3Q16798 604 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 ZNF792Q3KQV3 632 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 RGS22Q8NE09 1264 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 IL27Q8NEV9 243 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 SLC5A4Q9NY91 659 aa23.69■■□□□ 1.38
HMGA2-211ENST00000545998 V9GY48 417 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-211ENST00000545998 LARGE1O95461 756 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 CCL14Q16627 93 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 SLC9C1Q4G0N8 1177 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 NSMFQ6X4W1 530 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 TRIB2Q92519 343 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 MAF1Q9H063 256 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 FLRT1Q9NZU1 646 aa23.68■■□□□ 1.38
HMGA2-211ENST00000545998 OPLAHO14841 1288 aa23.67■■□□□ 1.38
HMGA2-211ENST00000545998 TRMT44Q8IYL2 757 aaKnown RBP23.67■■□□□ 1.38
HMGA2-211ENST00000545998 SH3TC2Q8TF17 1288 aa23.67■■□□□ 1.38
HMGA2-211ENST00000545998 LIMCH1Q9UPQ0 1083 aa23.67■■□□□ 1.38
HMGA2-211ENST00000545998 DIS3Q9Y2L1 958 aaKnown RBP23.67■■□□□ 1.38
HMGA2-211ENST00000545998 IGHA2P01877 340 aa23.66■■□□□ 1.38
HMGA2-211ENST00000545998 BAATQ14032 418 aaPredicted RBP23.66■■□□□ 1.38
HMGA2-211ENST00000545998 RNF207Q6ZRF8 634 aa23.66■■□□□ 1.38
HMGA2-211ENST00000545998 FAM133AQ8N9E0 248 aa23.66■■□□□ 1.38
HMGA2-211ENST00000545998 PHKBQ93100 1093 aa23.66■■□□□ 1.38
HMGA2-211ENST00000545998 MAML3Q96JK9 1138 aa23.66■■□□□ 1.38
HMGA2-211ENST00000545998 POTEB2H3BUK9 544 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 PRPF3O43395 683 aaKnown RBP23.65■■□□□ 1.38
HMGA2-211ENST00000545998 CNTN2Q02246 1040 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 OLFML2BQ68BL8 750 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 SLC30A10Q6XR72 485 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 MCF2L2Q86YR7 1114 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 TNS4Q8IZW8 715 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 GTF3C6Q969F1 213 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 ARMC5Q96C12 935 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 FGD4Q96M96 766 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 RNF26Q9BY78 433 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-211ENST00000545998 PTPDC1A2A3K4 754 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 CPLX1O14810 134 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 ST18O60284 1047 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 HMGCRP04035 888 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 RPS6P62753 249 aaKnown RBP23.65■■□□□ 1.38
HMGA2-211ENST00000545998 GHRHRQ02643 423 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 NECAB1Q8N987 351 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 TBC1D5Q92609 795 aa23.65■■□□□ 1.38
HMGA2-211ENST00000545998 MCM3APO60318 1980 aa23.64■■□□□ 1.38
HMGA2-211ENST00000545998 PPFIA3O75145 1194 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms