RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 VGLL4Q14135 290 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 MAP3K11Q16584 847 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 ELOA3BQ3SY89 546 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 VPS37DQ86XT2 251 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 APOBEC3FQ8IUX4 373 aaKnown RBP7.73□□□□□ -1.17
LDHC-209ENST00000545848 SPATA5Q8NB90 893 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 ELOA3Q8NG57 546 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.73□□□□□ -1.17
LDHC-209ENST00000545848 SH3RF3Q8TEJ3 882 aaPredicted RBP7.73□□□□□ -1.17
LDHC-209ENST00000545848 ZKSCAN4Q969J2 545 aaPredicted RBP7.73□□□□□ -1.17
LDHC-209ENST00000545848 TEKT1Q969V4 418 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 WNK4Q96J92 1243 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 HHIPL1Q96JK4 782 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 SLC30A3Q99726 388 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 PPP1R12CQ9BZL4 782 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 ELP3Q9H9T3 547 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 BRD7Q9NPI1 651 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 RNF186Q9NXI6 227 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 ABCF2Q9UG63 623 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 RBBP6Q7Z6E9 1792 aaKnown RBP7.73□□□□□ -1.17
LDHC-209ENST00000545848 PDS5AQ29RF7 1337 aaKnown RBP7.73□□□□□ -1.17
LDHC-209ENST00000545848 SALL3Q9BXA9 1300 aa7.73□□□□□ -1.17
LDHC-209ENST00000545848 TBC1D8O95759 1140 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 G3BP1Q13283 466 aaKnown RBP eCLIP7.72□□□□□ -1.17
LDHC-209ENST00000545848 HHIPL2Q6UWX4 724 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 AACSQ86V21 672 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 SKAP1Q86WV1 359 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 C2orf69Q8N8R5 385 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 ZNF280CQ8ND82 737 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 CEP63Q96MT8 703 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 HDAC9Q9UKV0 1011 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 LAMA4Q16363 1823 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 ALPK3Q96L96 1907 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 MYH4Q9Y623 1939 aa7.72□□□□□ -1.17
LDHC-209ENST00000545848 FRMPD3Q5JV73 1810 aa7.71□□□□□ -1.17
LDHC-209ENST00000545848 TCRBV5S4A2TA0A5A2 114 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 PEX10O60683 326 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 SIN3BO75182 1162 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 FRAT2O75474 233 aaPredicted RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 TRPA1O75762 1119 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 LDHBP07195 334 aaKnown RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 ALAS2P22557 587 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 CTGFP29279 349 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 HDLBPQ00341 1268 aaKnown RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 SPEM2Q0P670 501 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 PICALMQ13492 652 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 RAB44Q7Z6P3 723 aaPredicted RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 EXOC6Q8TAG9 804 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 WDR66Q8TBY9 1149 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 SCG3Q8WXD2 468 aaKnown RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 BRI3BPQ8WY22 251 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 SUSD3Q96L08 255 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 MDFIQ99750 246 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 C2orf49Q9BVC5 232 aaPredicted RBP7.71□□□□□ -1.18
LDHC-209ENST00000545848 GPR108Q9NPR9 543 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 USP40Q9NVE5 1235 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 DENND2AQ9ULE3 1009 aa7.71□□□□□ -1.18
LDHC-209ENST00000545848 SMCHD1A6NHR9 2005 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 GPR75-ASB3A0A0A6YYF3 556 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 ADAM23O75077 832 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 IGHDP01880 384 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 CYP2D6P10635 497 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 TYRO3Q06418 890 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 PTK7Q13308 1070 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 OS9Q13438 667 aaPredicted RBP7.7□□□□□ -1.18
LDHC-209ENST00000545848 PDE3AQ14432 1141 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 FAM43AQ8N2R8 423 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 MIGA1Q8NAN2 632 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 TBC1D22AQ8WUA7 517 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 OPTNQ96CV9 577 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 RIOK1Q9BRS2 568 aaKnown RBP7.7□□□□□ -1.18
LDHC-209ENST00000545848 AATFQ9NY61 560 aaKnown RBP eCLIP7.7□□□□□ -1.18
LDHC-209ENST00000545848 DDX19BQ9UMR2 479 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 LCTP09848 1927 aa7.7□□□□□ -1.18
LDHC-209ENST00000545848 COL2A1P02458 1487 aaPredicted RBP7.69□□□□□ -1.18
LDHC-209ENST00000545848 CYP2D7A0A087X1C5 515 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 ADARB2-AS1A8MUL3 147 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L21D6R901 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 FOXP2O15409 715 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 PRKAB2O43741 272 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 MAP4K4O95819 1239 aaPredicted RBP7.69□□□□□ -1.18
LDHC-209ENST00000545848 MAP2K2P36507 400 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 DPYDQ12882 1025 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 NOGQ13253 232 aa7.69□□□□□ -1.18
LDHC-209ENST00000545848 TTC39AQ5SRH9 613 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms