RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GNASQ5JWF2 1037 aa19.21■□□□□ 0.67
DDX55-212ENST00000544738 GMCL1P1Q8NEA9 526 aa19.21■□□□□ 0.67
DDX55-212ENST00000544738 NUP88Q99567 741 aaPredicted RBP19.21■□□□□ 0.67
DDX55-212ENST00000544738 SPC25Q9HBM1 224 aa19.21■□□□□ 0.67
DDX55-212ENST00000544738 ZNF214Q9UL59 606 aaPredicted RBP19.21■□□□□ 0.67
DDX55-212ENST00000544738 FAM126BQ8IXS8 530 aa19.2■□□□□ 0.66
DDX55-212ENST00000544738 REPS2Q8NFH8 660 aa19.2■□□□□ 0.66
DDX55-212ENST00000544738 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
DDX55-212ENST00000544738 TEX13BQ9BXU2 312 aa19.2■□□□□ 0.66
DDX55-212ENST00000544738 LNPKQ9C0E8 428 aa19.2■□□□□ 0.66
DDX55-212ENST00000544738 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
DDX55-212ENST00000544738 MUC6Q6W4X9 2439 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 RFXAPO00287 272 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 ZBED4O75132 1171 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 CCL23P55773 120 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 ALX1Q15699 326 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 MCMDC2Q4G0Z9 681 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 ALYREFQ86V81 257 aaKnown RBP19.19■□□□□ 0.66
DDX55-212ENST00000544738 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 FEM1BQ9UK73 627 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 SLC4A7Q9Y6M7 1214 aa19.19■□□□□ 0.66
DDX55-212ENST00000544738 ATP2A1O14983 1001 aa19.18■□□□□ 0.66
DDX55-212ENST00000544738 FOXP2O15409 715 aa19.18■□□□□ 0.66
DDX55-212ENST00000544738 FDX1P10109 184 aa19.18■□□□□ 0.66
DDX55-212ENST00000544738 ACVR2BQ13705 512 aa19.18■□□□□ 0.66
DDX55-212ENST00000544738 MSL3Q8N5Y2 521 aaKnown RBP19.18■□□□□ 0.66
DDX55-212ENST00000544738 HIPK3Q9H422 1215 aa19.18■□□□□ 0.66
DDX55-212ENST00000544738 COL11A1P12107 1806 aaPredicted RBP19.18■□□□□ 0.66
DDX55-212ENST00000544738 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 PRRC2BQ5JSZ5 2229 aaKnown RBP19.17■□□□□ 0.66
DDX55-212ENST00000544738 TRANK1O15050 2925 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 FAM86C2PA6NEL3 165 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 TSPY2A6NKD2 308 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 TRIM6-TRIM34B2RNG4 842 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
DDX55-212ENST00000544738 BMP3P12645 472 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 CST5P28325 142 aaPredicted RBP19.17■□□□□ 0.66
DDX55-212ENST00000544738 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 SLFN13Q68D06 897 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
DDX55-212ENST00000544738 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 CERS4Q9HA82 394 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDX55-212ENST00000544738 UMODL1Q5DID0 1318 aa19.17■□□□□ 0.66
DDX55-212ENST00000544738 CD4P01730 458 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 GJA9P57773 515 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 NUCB1Q02818 461 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 CCDC144BQ3MJ40 725 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 VPS53Q5VIR6 699 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 LRRC47Q8N1G4 583 aaKnown RBP19.16■□□□□ 0.66
DDX55-212ENST00000544738 EXOC6Q8TAG9 804 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 RILPL2Q969X0 211 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 KIFC2Q96AC6 838 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 GMCL1Q96IK5 515 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 SLC38A10Q9HBR0 1119 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 PCDHA11Q9Y5I1 949 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 MTCH2Q9Y6C9 303 aa19.16■□□□□ 0.66
DDX55-212ENST00000544738 A0A0D9SFI3 127 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 ADCY6O43306 1168 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 TLL1O43897 1013 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 ORC4O43929 436 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 IGHDP01880 384 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 OAZ1P54368 228 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 MFAP1P55081 439 aaKnown RBP19.15■□□□□ 0.66
DDX55-212ENST00000544738 MAMDC4Q6UXC1 1216 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 CPXCR1Q8N123 301 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 CHURC1Q8WUH1 139 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 FAM227BQ96M60 508 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.15■□□□□ 0.66
DDX55-212ENST00000544738 FBXO40Q9UH90 709 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
DDX55-212ENST00000544738 TMEM232C9JQI7 657 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 RANBP6O60518 1105 aaKnown RBP19.14■□□□□ 0.65
DDX55-212ENST00000544738 GPR37L1O60883 481 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 FGAP02671 866 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 FGRP09769 529 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 SLC1A4P43007 532 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 STAT2P52630 851 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 BEX3Q00994 111 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 NMIQ13287 307 aaPredicted RBP19.14■□□□□ 0.65
DDX55-212ENST00000544738 KRT40Q6A162 431 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
DDX55-212ENST00000544738 FAM160B2Q86V87 743 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 PLEKHM2Q8IWE5 1019 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 RPUSD2Q8IZ73 545 aaKnown RBP19.14■□□□□ 0.65
DDX55-212ENST00000544738 KHSRPQ92945 711 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■■□ 20.7
DDX55-212ENST00000544738 UPF3AQ9H1J1 476 aaKnown RBP19.14■□□□□ 0.65
DDX55-212ENST00000544738 COG5Q9UP83 839 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 ZMYM6O95789 1325 aa19.14■□□□□ 0.65
DDX55-212ENST00000544738 HSPD1P10809 573 aaKnown RBP19.13■□□□□ 0.65
DDX55-212ENST00000544738 ATP2A2P16615 1042 aaKnown RBP19.13■□□□□ 0.65
DDX55-212ENST00000544738 CXCL17Q6UXB2 119 aa19.13■□□□□ 0.65
DDX55-212ENST00000544738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.13■□□□□ 0.65
DDX55-212ENST00000544738 CHST13Q8NET6 341 aa19.13■□□□□ 0.65
DDX55-212ENST00000544738 STAG1Q8WVM7 1258 aa19.13■□□□□ 0.65
DDX55-212ENST00000544738 TRPV6Q9H1D0 765 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms