RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 LRRC41Q15345 812 aa27.14■■□□□ 1.94
CHFR-222ENST00000544093 DNAH12Q6ZR08 3092 aa27.13■■□□□ 1.93
CHFR-222ENST00000544093 SOWAHBA6NEL2 793 aa27.13■■□□□ 1.93
CHFR-222ENST00000544093 CDC37Q16543 378 aaPredicted RBP27.13■■□□□ 1.93
CHFR-222ENST00000544093 RNF20Q5VTR2 975 aa27.13■■□□□ 1.93
CHFR-222ENST00000544093 STOX1Q6ZVD7 989 aa27.13■■□□□ 1.93
CHFR-222ENST00000544093 C7orf61Q8IZ16 206 aa27.13■■□□□ 1.93
CHFR-222ENST00000544093 ADGRF4Q8IZF3 695 aa27.13■■□□□ 1.93
CHFR-222ENST00000544093 MPHOSPH6Q99547 160 aaKnown RBP27.13■■□□□ 1.93
CHFR-222ENST00000544093 PTPDC1A2A3K4 754 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 NFIBO00712 420 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 DHX16O60231 1041 aaKnown RBP27.12■■□□□ 1.93
CHFR-222ENST00000544093 DUSP11O75319 330 aaKnown RBP27.12■■□□□ 1.93
CHFR-222ENST00000544093 BAATQ14032 418 aaPredicted RBP27.12■■□□□ 1.93
CHFR-222ENST00000544093 RNF207Q6ZRF8 634 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 SKAP1Q86WV1 359 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 MB21D2Q8IYB1 491 aaPredicted RBP27.12■■□□□ 1.93
CHFR-222ENST00000544093 RGS22Q8NE09 1264 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 TAF6LQ9Y6J9 622 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 ABCB11O95342 1321 aa27.12■■□□□ 1.93
CHFR-222ENST00000544093 MYCNP04198 464 aaPredicted RBP27.11■■□□□ 1.93
CHFR-222ENST00000544093 NECTIN1Q15223 517 aa27.11■■□□□ 1.93
CHFR-222ENST00000544093 TMEM67Q5HYA8 995 aa27.11■■□□□ 1.93
CHFR-222ENST00000544093 ERICH6BQ5W0A0 696 aa27.11■■□□□ 1.93
CHFR-222ENST00000544093 CATIPQ7Z7H3 387 aa27.11■■□□□ 1.93
CHFR-222ENST00000544093 CLEC4DQ8WXI8 215 aa27.11■■□□□ 1.93
CHFR-222ENST00000544093 SPC25Q9HBM1 224 aa27.11■■□□□ 1.93
CHFR-222ENST00000544093 LCTP09848 1927 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 KLRF2D3W0D1 207 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 SLC27A2O14975 620 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 MCM5P33992 734 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 TRAF1Q13077 416 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 LRRC26Q2I0M4 334 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 CCDC144BQ3MJ40 725 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 MORC4Q8TE76 937 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 TSEN34Q9BSV6 310 aaKnown RBP27.1■■□□□ 1.93
CHFR-222ENST00000544093 CPVLQ9H3G5 476 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 PHF24Q9UPV7 400 aa27.1■■□□□ 1.93
CHFR-222ENST00000544093 PALM3A6NDB9 673 aaPredicted RBP27.09■■□□□ 1.93
CHFR-222ENST00000544093 B4DLN1 442 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 MRPL12P52815 198 aaKnown RBP27.09■■□□□ 1.93
CHFR-222ENST00000544093 GRM4Q14833 912 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 USH1GQ495M9 461 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 CREB3L3Q68CJ9 461 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 MCF2L2Q86YR7 1114 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 TMTC2Q8N394 836 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 TMEM87BQ96K49 555 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 KATNBL1Q9H079 304 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 JMJD4Q9H9V9 463 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 VTA1Q9NP79 307 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 MAD2L2Q9UI95 211 aa27.09■■□□□ 1.93
CHFR-222ENST00000544093 COLQQ9Y215 455 aaPredicted RBP27.09■■□□□ 1.93
CHFR-222ENST00000544093 ADAMTS4O75173 837 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 PGK1P00558 417 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 QRICH1Q2TAL8 776 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 HABP4Q5JVS0 413 aaKnown RBP27.08■■□□□ 1.93
CHFR-222ENST00000544093 CHRDL2Q6WN34 429 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 FBXO11Q86XK2 927 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 DNERQ8NFT8 737 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 IGDCC4Q8TDY8 1250 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 MAP3K14Q99558 947 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 MRPL11Q9Y3B7 192 aaKnown RBP27.08■■□□□ 1.93
CHFR-222ENST00000544093 SYNRGQ9UMZ2 1314 aa27.08■■□□□ 1.93
CHFR-222ENST00000544093 LRRC37A2A6NM11 1700 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 CENPBP07199 599 aaPredicted RBP27.07■■□□□ 1.92
CHFR-222ENST00000544093 CALML3P27482 149 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 CST5P28325 142 aaPredicted RBP27.07■■□□□ 1.92
CHFR-222ENST00000544093 ADCYAP1R1P41586 468 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 ALDH5A1P51649 535 aaPredicted RBP27.07■■□□□ 1.92
CHFR-222ENST00000544093 ANTXR2P58335 489 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 RPS6P62753 249 aaKnown RBP27.07■■□□□ 1.92
CHFR-222ENST00000544093 TROAPQ12815 778 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 C1orf53Q5VUE5 145 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 CHST3Q7LGC8 479 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 STAG2Q8N3U4 1231 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 AMNQ9BXJ7 453 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 ASTN1O14525 1302 aa27.07■■□□□ 1.92
CHFR-222ENST00000544093 MOXD2PA6NHM9 499 aa27.06■■□□□ 1.92
CHFR-222ENST00000544093 PRC1O43663 620 aa27.06■■□□□ 1.92
CHFR-222ENST00000544093 SNX17Q15036 470 aa27.06■■□□□ 1.92
CHFR-222ENST00000544093 SLC30A10Q6XR72 485 aa27.06■■□□□ 1.92
CHFR-222ENST00000544093 SLC39A5Q6ZMH5 540 aa27.06■■□□□ 1.92
CHFR-222ENST00000544093 PCSK9Q8NBP7 692 aaKnown RBP27.06■■□□□ 1.92
CHFR-222ENST00000544093 VAT1LQ9HCJ6 419 aa27.06■■□□□ 1.92
CHFR-222ENST00000544093 ZBTB5O15062 677 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 ATN1P54259 1190 aaPredicted RBP27.05■■□□□ 1.92
CHFR-222ENST00000544093 GJA9P57773 515 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 TNFAIP2Q03169 654 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 IQSEC1Q6DN90 963 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 KLHDC9Q8NEP7 349 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 NUP133Q8WUM0 1156 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 LENG1Q96BZ8 264 aaPredicted RBP27.05■■□□□ 1.92
CHFR-222ENST00000544093 MTMR8Q96EF0 704 aa27.05■■□□□ 1.92
CHFR-222ENST00000544093 UPF3AQ9H1J1 476 aaKnown RBP27.05■■□□□ 1.92
CHFR-222ENST00000544093 A0A1W2PPC1 479 aa27.04■■□□□ 1.92
CHFR-222ENST00000544093 DDAH1O94760 285 aa27.04■■□□□ 1.92
CHFR-222ENST00000544093 KIF5BP33176 963 aa27.04■■□□□ 1.92
CHFR-222ENST00000544093 NKX3-2P78367 333 aa27.04■■□□□ 1.92
CHFR-222ENST00000544093 LY9Q9HBG7 655 aa27.04■■□□□ 1.92
CHFR-222ENST00000544093 C6orf222P0C671 652 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms