RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MED15Q96RN5 788 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 CSRNP1Q96S65 589 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 PPP1R3GB7ZBB8 358 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 RAD17O75943 681 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 TNNI2P48788 182 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 MRPL12P52815 198 aaKnown RBP19.26■□□□□ 0.67
PTPRO-209ENST00000543886 RBM26Q5T8P6 1007 aaKnown RBP19.26■□□□□ 0.67
PTPRO-209ENST00000543886 POTEDQ86YR6 584 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 PRIMPOLQ96LW4 560 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 CUEDC2Q9H467 287 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
PTPRO-209ENST00000543886 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 MYL1P05976 194 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 STX17P56962 302 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 CALCRLQ16602 461 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 TPD52L1Q16890 204 aaPredicted RBP19.25■□□□□ 0.67
PTPRO-209ENST00000543886 NAALADL2Q58DX5 795 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 SLC16A10Q8TF71 515 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 MAGEF1Q9HAY2 307 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 SAMSN1Q9NSI8 373 aaKnown RBP19.25■□□□□ 0.67
PTPRO-209ENST00000543886 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
PTPRO-209ENST00000543886 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 TMEM232C9JQI7 657 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 PSMD14O00487 310 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 TECP42680 631 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 UBE2SQ16763 222 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 ZNF658Q5TYW1 1059 aaPredicted RBP19.24■□□□□ 0.67
PTPRO-209ENST00000543886 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 PLIN2Q99541 437 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 UQCRHLA0A096LP55 91 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 UQCRHP07919 91 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 DLGAP5Q15398 846 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 TMEM266Q2M3C6 531 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 GMCL1P1Q8NEA9 526 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 GLT8D2Q9H1C3 349 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 PSTPIP2Q9H939 334 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 INTS13Q9NVM9 706 aa19.24■□□□□ 0.67
PTPRO-209ENST00000543886 TCP10L2B9ZVM9 353 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 GH2P01242 217 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 VIL1P09327 827 aaKnown RBP19.23■□□□□ 0.67
PTPRO-209ENST00000543886 PLCG1P19174 1290 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 TXKP42681 527 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 QRICH1Q2TAL8 776 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 C16orf45Q96MC5 204 aaPredicted RBP19.23■□□□□ 0.67
PTPRO-209ENST00000543886 HERC5Q9UII4 1024 aaKnown RBP19.23■□□□□ 0.67
PTPRO-209ENST00000543886 KCNA3P22001 575 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 CLK2P49760 499 aaKnown RBP19.23■□□□□ 0.67
PTPRO-209ENST00000543886 CDC37Q16543 378 aaPredicted RBP19.23■□□□□ 0.67
PTPRO-209ENST00000543886 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 FBXO41Q8TF61 875 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 VPS33BQ9H267 617 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTPRO-209ENST00000543886 KBTBD4Q9NVX7 518 aa19.23■□□□□ 0.67
PTPRO-209ENST00000543886 CLRN2A0PK11 232 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 F5H6K3 240 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 TDP2O95551 362 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 KLRC3Q07444 240 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 PAK1Q13153 545 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 IGSF22Q8N9C0 903 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 CALML4Q96GE6 196 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 MTMR9Q96QG7 549 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 RAB34Q9BZG1 259 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 RWDD2AQ9UIY3 292 aa19.22■□□□□ 0.67
PTPRO-209ENST00000543886 SLC37A4O43826 429 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 NIM1KQ8IY84 436 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 CCDC112Q8NEF3 446 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 GMCL1Q96IK5 515 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 MAP7D2Q96T17 732 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 GMLQ99445 158 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 ZNF70Q9UC06 446 aaPredicted RBP19.21■□□□□ 0.67
PTPRO-209ENST00000543886 PCDHA1Q9Y5I3 950 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 COL4A5P29400 1685 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 NDUFB10O96000 172 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 FXR2P51116 673 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTPRO-209ENST00000543886 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
PTPRO-209ENST00000543886 SEMA3FQ13275 785 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 KCNB1Q14721 858 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 CDKAL1Q5VV42 579 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 CTAGE1Q96RT6 745 aa19.21■□□□□ 0.67
PTPRO-209ENST00000543886 SPECC1LQ69YQ0 1117 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 PPP4R3AQ6IN85 833 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 NELFBQ8WX92 580 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 CCDC47Q96A33 483 aaKnown RBP19.2■□□□□ 0.66
PTPRO-209ENST00000543886 NAP1L4Q99733 375 aaKnown RBP19.2■□□□□ 0.66
PTPRO-209ENST00000543886 LRWD1Q9UFC0 647 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 ZNRF3Q9ULT6 936 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 A0A1B0GTH6 734 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 TNNT1P13805 278 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 GCFC2P16383 781 aaKnown RBP19.2■□□□□ 0.66
PTPRO-209ENST00000543886 PTPN21Q16825 1174 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 KMT5BQ4FZB7 885 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 CCAR2Q8N163 923 aaKnown RBP19.2■□□□□ 0.66
PTPRO-209ENST00000543886 MYRIPQ8NFW9 859 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 FAM151AQ8WW52 585 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
PTPRO-209ENST00000543886 KCND1Q9NSA2 647 aa19.2■□□□□ 0.66
PTPRO-209ENST00000543886 DDX25Q9UHL0 483 aaKnown RBP19.2■□□□□ 0.66
PTPRO-209ENST00000543886 GDAQ9Y2T3 454 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms