RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
VPS37B-204ENST00000543590 CCDC144BQ3MJ40 725 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 KIAA1211Q6ZU35 1233 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 CLEC4DQ8WXI8 215 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 PHF24Q9UPV7 400 aa16.71■□□□□ 0.27
VPS37B-204ENST00000543590 ADCY6O43306 1168 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 ADAMTS4O75173 837 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 DUSP11O75319 330 aaKnown RBP16.7■□□□□ 0.26
VPS37B-204ENST00000543590 PARP1P09874 1014 aaKnown RBP16.7■□□□□ 0.26
VPS37B-204ENST00000543590 RTP1P59025 263 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 RALYLQ86SE5 291 aaKnown RBP16.7■□□□□ 0.26
VPS37B-204ENST00000543590 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 PURBQ96QR8 312 aaKnown RBP16.7■□□□□ 0.26
VPS37B-204ENST00000543590 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
VPS37B-204ENST00000543590 SYNRGQ9UMZ2 1314 aa16.69■□□□□ 0.26
VPS37B-204ENST00000543590 TRIOBPQ9H2D6 2365 aa16.69■□□□□ 0.26
VPS37B-204ENST00000543590 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
VPS37B-204ENST00000543590 IFIT3O14879 490 aaKnown RBP16.69■□□□□ 0.26
VPS37B-204ENST00000543590 GDF15Q99988 308 aa16.69■□□□□ 0.26
VPS37B-204ENST00000543590 LSG1Q9H089 658 aaKnown RBP16.69■□□□□ 0.26
VPS37B-204ENST00000543590 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
VPS37B-204ENST00000543590 FXR1P51114 621 aaKnown RBP eCLIP16.68■□□□□ 0.26
VPS37B-204ENST00000543590 CDC37Q16543 378 aaPredicted RBP16.68■□□□□ 0.26
VPS37B-204ENST00000543590 USH1GQ495M9 461 aa16.68■□□□□ 0.26
VPS37B-204ENST00000543590 STAG2Q8N3U4 1231 aa16.68■□□□□ 0.26
VPS37B-204ENST00000543590 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
VPS37B-204ENST00000543590 TSEN34Q9BSV6 310 aaKnown RBP16.68■□□□□ 0.26
VPS37B-204ENST00000543590 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
VPS37B-204ENST00000543590 ERICH2A1L162 156 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 CALML3P27482 149 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 MAGEA10P43363 369 aaPredicted RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 SNX17Q15036 470 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 RNF207Q6ZRF8 634 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 VAT1LQ9HCJ6 419 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 PCDH10Q9P2E7 1040 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 LCTP09848 1927 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 MYADML2A6NDP7 307 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 KLRF2D3W0D1 207 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 BMP8BP34820 402 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 ALDH5A1P51649 535 aaPredicted RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 ACLYP53396 1101 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 ANTXR2P58335 489 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 KCNA10Q16322 511 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 CCSAPQ6IQ19 270 aaPredicted RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 EEPD1Q7L9B9 569 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 UPF3AQ9H1J1 476 aaKnown RBP16.67■□□□□ 0.26
VPS37B-204ENST00000543590 SENP2Q9HC62 589 aa16.67■□□□□ 0.26
VPS37B-204ENST00000543590 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 A0A1W2PPC1 479 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 A0A1W2PQ45 241 aaPredicted RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 A0A1W2PQY0 241 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 C6orf222P0C671 652 aaPredicted RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 CST5P28325 142 aaPredicted RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 GJA9P57773 515 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 WTAPQ15007 396 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 FBXO16Q8IX29 292 aaPredicted RBP16.66■□□□□ 0.26
VPS37B-204ENST00000543590 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 SPC25Q9HBM1 224 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 ANO2Q9NQ90 1003 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 PDGFCQ9NRA1 345 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
VPS37B-204ENST00000543590 ABCB11O95342 1321 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 LOC102724159A0A0B4J2E5 919 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 MOXD2PA6NHM9 499 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 SLC27A2O14975 620 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 PWP2Q15269 919 aaKnown RBP16.65■□□□□ 0.26
VPS37B-204ENST00000543590 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 TAPT1Q6NXT6 567 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 IGDCC4Q8TDY8 1250 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
VPS37B-204ENST00000543590 GNEQ9Y223 722 aaKnown RBP16.65■□□□□ 0.26
VPS37B-204ENST00000543590 LRRC37A2A6NM11 1700 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 CTAGE5O15320 804 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 SMPD1P17405 629 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 NKX3-2P78367 333 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms