RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 ZNF512BQ96KM6 892 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-208ENST00000542570 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 MON2Q7Z3U7 1717 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 GPR75-ASB3A0A0A6YYF3 556 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 PHACTR2O75167 634 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 KRT9P35527 623 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 IGBP1P78318 339 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 CXCL9Q07325 125 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 CTTNQ14247 550 aaKnown RBP11.33□□□□□ -0.59
TOP3A-208ENST00000542570 GOLGA6L1Q8N7Z2 621 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 TTC16Q8NEE8 873 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.59
TOP3A-208ENST00000542570 SPON1Q9HCB6 807 aa11.33□□□□□ -0.59
TOP3A-208ENST00000542570 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.59
TOP3A-208ENST00000542570 CASQ1P31415 396 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 UTP14CQ5TAP6 766 aaKnown RBP11.33□□□□□ -0.6
TOP3A-208ENST00000542570 NLRX1Q86UT6 975 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 CAPZA3Q96KX2 299 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 ASNSP08243 561 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 CUL4BQ13620 913 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 LRCH2Q5VUJ6 765 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 MIER3Q7Z3K6 550 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 ZNF70Q9UC06 446 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-208ENST00000542570 PNMA6FA0A0J9YX94 578 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 NDUFB10O96000 172 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
TOP3A-208ENST00000542570 HAUS3Q68CZ6 603 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
TOP3A-208ENST00000542570 MRPL11Q9Y3B7 192 aaKnown RBP11.33□□□□□ -0.6
TOP3A-208ENST00000542570 PPARDQ03181 441 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 CCDC42Q96M95 316 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-208ENST00000542570 CLIC2O15247 247 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 ORC4O43929 436 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 USO1O60763 962 aaKnown RBP11.32□□□□□ -0.6
TOP3A-208ENST00000542570 XKR9Q5GH70 373 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 FAM114A1Q8IWE2 563 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 BAG1Q99933 345 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-208ENST00000542570 ANO3Q9BYT9 981 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 GGA3Q9NZ52 723 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 A0A1W2PQ27 194 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 A0A1W2PQ64 194 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 A0A1W2PQD8 194 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 CCP110O43303 1012 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 GJC1P36383 396 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 FAM102BQ5T8I3 360 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-208ENST00000542570 METTL13Q8N6R0 699 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 CCDC127Q96BQ5 260 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 PYCARDQ9ULZ3 195 aa11.32□□□□□ -0.6
TOP3A-208ENST00000542570 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 ZBTB5O15062 677 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 KRT13P13646 458 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 SPAG1Q07617 926 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 ANKRD13CQ8N6S4 541 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 SLF1Q9BQI6 1058 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 ZNF577Q9BSK1 485 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
TOP3A-208ENST00000542570 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 DLG5Q8TDM6 1919 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 PTPREP23469 700 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 MTMR2Q13614 643 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 CTAGE1Q96RT6 745 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 LTN1O94822 1766 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 E9PMD0 336 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 EXOC3O60645 756 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 PPP6R2O75170 966 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 BIRC3Q13489 604 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 ZNF569Q5MCW4 686 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
TOP3A-208ENST00000542570 LUC7LQ9NQ29 371 aaKnown RBP11.31□□□□□ -0.6
TOP3A-208ENST00000542570 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 DDNO94850 711 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-208ENST00000542570 PDHBP11177 359 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 GRM4Q14833 912 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 Q3C1V9 767 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 CCDC150Q8NCX0 1101 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 PAGE5Q96GU1 130 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 GTPBP4Q9BZE4 634 aaKnown RBP11.3□□□□□ -0.6
TOP3A-208ENST00000542570 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 MLXIPQ9HAP2 919 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 ARGLU1Q9NWB6 273 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-208ENST00000542570 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 TM4SF1P30408 202 aa11.3□□□□□ -0.6
TOP3A-208ENST00000542570 CETN1Q12798 172 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms