RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ASTN1O14525 1302 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 KLRF2D3W0D1 207 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 NFIBO00712 420 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 PRC1O43663 620 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 GRM4Q14833 912 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 RNF20Q5VTR2 975 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 MTMR8Q96EF0 704 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 GPHNQ9NQX3 736 aaPredicted RBP18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 CNPY2Q9Y2B0 182 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 MYH6P13533 1939 aa18.03■□□□□ 0.48
ECHDC2-223ENST00000542552 CDC37Q16543 378 aaPredicted RBP18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 RGS22Q8NE09 1264 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 KCNB2Q92953 911 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 MAP3K14Q99558 947 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 KATNBL1Q9H079 304 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 C11orf49Q9H6J7 331 aa18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.02■□□□□ 0.48
ECHDC2-223ENST00000542552 SH2B2O14492 632 aaPredicted RBP18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 LIFRP42702 1097 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 ACVR2BQ13705 512 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 BAATQ14032 418 aaPredicted RBP18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 QRICH1Q2TAL8 776 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 NSMFQ6X4W1 530 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 CATIPQ7Z7H3 387 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 CCDC144CPQ8IYA2 1237 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 MAF1Q9H063 256 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 ABHD16BQ9H3Z7 469 aa18.01■□□□□ 0.47
ECHDC2-223ENST00000542552 RANBP2P49792 3224 aaKnown RBP18■□□□□ 0.47
ECHDC2-223ENST00000542552 ASB14A6NK59 587 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 DNM1LO00429 736 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 AKR1A1P14550 325 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 ANO1Q5XXA6 986 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 ARRDC4Q8NCT1 418 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 MORC4Q8TE76 937 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 RIOX1Q9H6W3 641 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 LRRC37A2A6NM11 1700 aa18■□□□□ 0.47
ECHDC2-223ENST00000542552 ABCB11O95342 1321 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 LOC102724159A0A0B4J2E5 919 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 RARBP10826 455 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 EXOSC10Q01780 885 aaKnown RBP17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 PWP2Q15269 919 aaKnown RBP17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 USH1GQ495M9 461 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 SLC30A10Q6XR72 485 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 RNF207Q6ZRF8 634 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 DPF3Q92784 378 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 PURBQ96QR8 312 aaKnown RBP17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
ECHDC2-223ENST00000542552 BAZ2BQ9UIF8 2168 aaKnown RBP17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 CYTH3O43739 400 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 DDAH1O94760 285 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 HSPA4P34932 840 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 RPS6P62753 249 aaKnown RBP17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 KRT32Q14532 448 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 LRRC41Q15345 812 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 ADCK5Q3MIX3 580 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 GJC2Q5T442 439 aaPredicted RBP17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 SGMS1Q86VZ5 419 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 XPNPEP3Q9NQH7 507 aa17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 ZHX1Q9UKY1 873 aaPredicted RBP17.98■□□□□ 0.47
ECHDC2-223ENST00000542552 PTPDC1A2A3K4 754 aa17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 H0YGN5 161 aa17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 ZBTB5O15062 677 aa17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 ADCY6O43306 1168 aa17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 DDX49Q9Y6V7 483 aaKnown RBP17.97■□□□□ 0.47
ECHDC2-223ENST00000542552 OPLAHO14841 1288 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 EPB41L2O43491 1005 aaKnown RBP17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 REC8O95072 547 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 CALML3P27482 149 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 ALDH5A1P51649 535 aaPredicted RBP17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 GHRHRQ02643 423 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 TBC1D5Q92609 795 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 MYL10Q9BUA6 226 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 NR2E3Q9Y5X4 410 aa17.96■□□□□ 0.47
ECHDC2-223ENST00000542552 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 KBTBD13C9JR72 458 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 EVI5O60447 810 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 PGK1P00558 417 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 EDNRBP24530 442 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 TAPT1Q6NXT6 567 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms