RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 TMEM132BQ14DG7 1078 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 TMEM67Q5HYA8 995 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 KIAA1755Q5JYT7 1200 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 FAM178BQ8IXR5 827 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 ARNTL2Q8WYA1 636 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 PHOX2BQ99453 314 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 UPF3AQ9H1J1 476 aaKnown RBP9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 ZSWIM6Q9HCJ5 1215 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 CABP5Q9NP86 173 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 ZHX1Q9UKY1 873 aaPredicted RBP9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 FAM184BQ9ULE4 1060 aa9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 MYO5AQ9Y4I1 1855 aaKnown RBP9.31□□□□□ -0.92
NPIPB4-215ENST00000542133 NAV1Q8NEY1 1877 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 LPXNO60711 386 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 FLOT1O75955 427 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 DYNLL1P63167 89 aaKnown RBP9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 TAP1Q03518 808 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 SEPT2Q15019 361 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 CCDC184Q52MB2 194 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 MSL3Q8N5Y2 521 aaKnown RBP9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 SLC43A3Q8NBI5 491 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 VTI1AQ96AJ9 217 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 NEUROD6Q96NK8 337 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 PPME1Q9Y570 386 aa9.3□□□□□ -0.92
NPIPB4-215ENST00000542133 A6NJR5 290 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 CTAGE5O15320 804 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 TRAK2O60296 914 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 SNAI1O95863 264 aaPredicted RBP9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 IL9P15248 144 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 GJA9P57773 515 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 TTLL4Q14679 1199 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 SPRED2Q7Z698 418 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 RIOX2Q8IUF8 465 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 ANKS1AQ92625 1134 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 UBE2ZQ9H832 354 aaPredicted RBP9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 SPTBN4Q9H254 2564 aa9.29□□□□□ -0.92
NPIPB4-215ENST00000542133 TANC1Q9C0D5 1861 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 DCXO43602 365 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 PFKMP08237 780 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 UQCRFS1P1P0C7P4 283 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 FOXK2Q01167 660 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 LEXMQ3ZCV2 418 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 MAMDC4Q6UXC1 1216 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 TSHZ1Q6ZSZ6 1077 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 TTC6Q86TZ1 520 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 SCLYQ96I15 445 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 SPC25Q9HBM1 224 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 SNRKQ9NRH2 765 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 ZNF214Q9UL59 606 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 PTPRSQ13332 1948 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 MCM3APO60318 1980 aa9.28□□□□□ -0.92
NPIPB4-215ENST00000542133 SCN5AQ14524 2016 aa9.27□□□□□ -0.92
NPIPB4-215ENST00000542133 B4GALT4O60513 344 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 CYP2E1P05181 493 aaPredicted RBP9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 COPB2P35606 906 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 USP5P45974 858 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 PLCD1P51178 756 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 NKX3-2P78367 333 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 GABPAQ06546 454 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 ACVR2BQ13705 512 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 CXCL17Q6UXB2 119 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 HFE2Q6ZVN8 426 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 FAM9BQ8IZU0 186 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 SPICE1Q8N0Z3 855 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 GDPD5Q8WTR4 605 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 TRPV6Q9H1D0 765 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 ADAMTS5Q9UNA0 930 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 ZNF536O15090 1300 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 GRIN2DO15399 1336 aa9.27□□□□□ -0.93
NPIPB4-215ENST00000542133 DNAJC25-GNG10A0A024R161 153 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 TTC36A6NLP5 189 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 MPHOSPH10O00566 681 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 WDR46O15213 610 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 KCNA5P22460 613 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 CALRP27797 417 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 STAT3P40763 770 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 BEX3Q00994 111 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 CCDC144BQ3MJ40 725 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 CLEC10AQ8IUN9 316 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 HERC6Q8IVU3 1022 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 NME8Q8N427 588 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 MIGA1Q8NAN2 632 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 PRSS33Q8NF86 280 aa9.26□□□□□ -0.93
NPIPB4-215ENST00000542133 REPS2Q8NFH8 660 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms