RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 HEATR3Q7Z4Q2 680 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 BLIDQ8IZY5 108 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 PRMT6Q96LA8 375 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-227ENST00000541342 HOOK1Q9UJC3 728 aaKnown RBP19.38■□□□□ 0.69
SPIDR-227ENST00000541342 PCDHA4Q9UN74 947 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 CDK11BP21127 795 aaKnown RBP19.37■□□□□ 0.69
SPIDR-227ENST00000541342 FAM193AP78312 1265 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 PPP2R3AQ06190 1150 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 ZNF174Q15697 407 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 DHX58Q96C10 678 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 FRMPD2Q68DX3 1309 aaPredicted RBP19.37■□□□□ 0.69
SPIDR-227ENST00000541342 SOWAHDA6NJG2 315 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 RAD17O75943 681 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 TTLL1O95922 423 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 CD44P16070 742 aaKnown RBP19.37■□□□□ 0.69
SPIDR-227ENST00000541342 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 TRIML1Q8N9V2 468 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 RASGRP4Q8TDF6 673 aa19.37■□□□□ 0.69
SPIDR-227ENST00000541342 DHX36Q9H2U1 1008 aaKnown RBP19.37■□□□□ 0.69
SPIDR-227ENST00000541342 GOLGA6L9A6NEM1 432 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 SNHG28P0DPA3 235 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 CALML3P27482 149 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 KARSQ15046 597 aaKnown RBP19.36■□□□□ 0.69
SPIDR-227ENST00000541342 UBA5Q9GZZ9 404 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 PSMD14O00487 310 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 LARGE2Q8N3Y3 721 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
SPIDR-227ENST00000541342 NPM3O75607 178 aaKnown RBP19.36■□□□□ 0.69
SPIDR-227ENST00000541342 CASP1P29466 404 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 RSBN1LQ6PCB5 846 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-227ENST00000541342 PI4KBQ9UBF8 816 aa19.36■□□□□ 0.69
SPIDR-227ENST00000541342 GPR161Q8N6U8 529 aaKnown RBP19.35■□□□□ 0.69
SPIDR-227ENST00000541342 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.35■□□□□ 0.69
SPIDR-227ENST00000541342 BRCA1P38398 1863 aaKnown RBP19.35■□□□□ 0.69
SPIDR-227ENST00000541342 RAD9BQ6WBX8 426 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 CREBRFQ8IUR6 639 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 ZSCAN29Q8IWY8 852 aaPredicted RBP19.35■□□□□ 0.69
SPIDR-227ENST00000541342 EPSTI1Q96J88 318 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 VAT1LQ9HCJ6 419 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 ATF5Q9Y2D1 282 aaPredicted RBP19.35■□□□□ 0.69
SPIDR-227ENST00000541342 SMARCA1P28370 1054 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 PBX1P40424 430 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 CUL4BQ13620 913 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 PIGSQ96S52 555 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 GMLQ99445 158 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 DACH1Q9UI36 760 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
SPIDR-227ENST00000541342 VIL1P09327 827 aaKnown RBP19.34■□□□□ 0.69
SPIDR-227ENST00000541342 TPM1P09493 284 aa19.34■□□□□ 0.69
SPIDR-227ENST00000541342 ERCC5P28715 1186 aaPredicted RBP19.34■□□□□ 0.69
SPIDR-227ENST00000541342 TEX35Q5T0J7 233 aa19.34■□□□□ 0.69
SPIDR-227ENST00000541342 DAGLBQ8NCG7 672 aa19.34■□□□□ 0.69
SPIDR-227ENST00000541342 PARD6BQ9BYG5 372 aa19.34■□□□□ 0.69
SPIDR-227ENST00000541342 ZBTB12Q9Y330 459 aaPredicted RBP19.34■□□□□ 0.69
SPIDR-227ENST00000541342 TRAPPC10P48553 1259 aa19.33■□□□□ 0.69
SPIDR-227ENST00000541342 ATP2C1P98194 919 aaPredicted RBP19.33■□□□□ 0.69
SPIDR-227ENST00000541342 PTGDRQ13258 359 aa19.33■□□□□ 0.69
SPIDR-227ENST00000541342 SH3RF1Q7Z6J0 888 aa19.33■□□□□ 0.69
SPIDR-227ENST00000541342 CCDC148Q8NFR7 591 aa19.33■□□□□ 0.69
SPIDR-227ENST00000541342 RRP36Q96EU6 259 aaKnown RBP19.33■□□□□ 0.69
SPIDR-227ENST00000541342 PANX2Q96RD6 677 aa19.33■□□□□ 0.69
SPIDR-227ENST00000541342 ZCCHC17Q9NP64 241 aaKnown RBP19.33■□□□□ 0.69
SPIDR-227ENST00000541342 RBL2Q08999 1139 aa19.33■□□□□ 0.69
SPIDR-227ENST00000541342 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 POLR3GO15318 223 aaPredicted RBP19.33■□□□□ 0.68
SPIDR-227ENST00000541342 ASPRV1Q53RT3 343 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 CDKAL1Q5VV42 579 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 TATDN1Q6P1N9 297 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC17Q96LX7 622 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 ZMYND12Q9H0C1 365 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 ADGRG1Q9Y653 693 aa19.33■□□□□ 0.68
SPIDR-227ENST00000541342 AKR1B15C9JRZ8 316 aaPredicted RBP19.32■□□□□ 0.68
SPIDR-227ENST00000541342 ATP8B1O43520 1251 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 SMYD4Q8IYR2 804 aaPredicted RBP19.32■□□□□ 0.68
SPIDR-227ENST00000541342 GPCPD1Q9NPB8 672 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 ADD3Q9UEY8 706 aaKnown RBP19.32■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC66A2RUB6 948 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 MCM7P33993 719 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 CERKLQ49MI3 558 aaPredicted RBP19.32■□□□□ 0.68
SPIDR-227ENST00000541342 KANK3Q6NY19 840 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 FUT8Q9BYC5 575 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
SPIDR-227ENST00000541342 SPDYE2BA6NHP3 402 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 ENTPD3O75355 529 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 BMP15O95972 392 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 SPDYE6P0CI01 402 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 STX17P56962 302 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 ZNF543Q08ER8 600 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 DPYDQ12882 1025 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 GALNT17Q6IS24 598 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC12Q8WUD4 166 aaPredicted RBP19.31■□□□□ 0.68
SPIDR-227ENST00000541342 LZTFL1Q9NQ48 299 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 FER1L6Q2WGJ9 1857 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 AFMP43652 599 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 NAPAP54920 295 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 TGFB2P61812 414 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms