RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 GPR101Q96P66 508 aaPredicted RBP11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 CRACR2AQ9BSW2 395 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 IL17RBQ9NRM6 502 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 ITGB4P16144 1822 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 PDS5AQ29RF7 1337 aaKnown RBP11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 NOP2P46087 812 aaKnown RBP11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 LIG3P49916 1009 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 ASIC1P78348 528 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 TFAP4Q01664 338 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 ITPK1Q13572 414 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 TRADDQ15628 312 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 LETM2Q2VYF4 491 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 DYMQ7RTS9 669 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 MAGEC2Q9UBF1 373 aaPredicted RBP11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 ANAPC4Q9UJX5 808 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 CCDC194A0A1B0GVG4 234 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 H7C1D1 291 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 NTSR2O95665 410 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 SLC20A2Q08357 652 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 LRRC41Q15345 812 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 MIIPQ5JXC2 388 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 ARL8AQ96BM9 186 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 NOC4LQ9BVI4 516 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 TTYH3Q9C0H2 523 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 GBP3Q9H0R5 595 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 RBM28Q9NW13 759 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 TECP42680 631 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 ATP1A2P50993 1020 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 GRIK5Q16478 980 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 PAPD7Q5XG87 772 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 CCNI2Q6ZMN8 369 aaPredicted RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 GOLGA6L1Q8N7Z2 621 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 ARHGAP20Q9P2F6 1191 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 PCDHA6Q9UN73 950 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 PACSIN2Q9UNF0 486 aaPredicted RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 PCDHA8Q9Y5H6 950 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 BCL9O00512 1426 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 PSMA7O14818 248 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 SRGNP10124 158 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 NSUN4Q96CB9 384 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 MYO1AQ9UBC5 1043 aa11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDC42SE1-207ENST00000540998 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 KRT86O43790 486 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 IVLP07476 585 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 CREG2Q8IUH2 290 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 PLCH1Q4KWH8 1693 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 CCNT1O60563 726 aaKnown RBP11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 BMP15O95972 392 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 ARID5AQ03989 594 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 GFPT1Q06210 699 aaPredicted RBP11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 TRIM14Q14142 442 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 KIAA0895Q8NCT3 520 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 CCDC42Q96M95 316 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 SEMA6BQ9H3T3 888 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 MED4Q9NPJ6 270 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 RMND1Q9NWS8 449 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
CDC42SE1-207ENST00000540998 NHSL1Q5SYE7 1610 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 DDAH1O94760 285 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 KRT14P02533 472 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 MICALL1Q8N3F8 863 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 GIMAP8Q8ND71 665 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 IFIH1Q9BYX4 1025 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 GOLPH3Q9H4A6 298 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 NLRC4Q9NPP4 1024 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 TMEM260Q9NX78 707 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 SLAIN2Q9P270 581 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 LRP5O75197 1615 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 ANKRD36CQ5JPF3 1778 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 LONP1P36776 959 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 AARSP49588 968 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 KIF5AQ12840 1032 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 PDCLQ13371 301 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 KAT2BQ92831 832 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 P2RX5Q93086 422 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 IPO7O95373 1038 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 FAM153BP0C7A2 387 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 DNM2P50570 870 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 RCAN1P53805 252 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms