RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 PI4KBQ9UBF8 816 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 BIN2Q9UBW5 565 aaPredicted RBP15.55■□□□□ 0.08
RTN3-210ENST00000540798 ADD3Q9UEY8 706 aaKnown RBP15.55■□□□□ 0.08
RTN3-210ENST00000540798 MYH7BA7E2Y1 1941 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 UBA7P41226 1012 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
RTN3-210ENST00000540798 HSP90AA4PQ58FG1 418 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 CEP135Q66GS9 1140 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 PPP1R13BQ96KQ4 1090 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 GPCPD1Q9NPB8 672 aa15.55■□□□□ 0.08
RTN3-210ENST00000540798 LRRC10BA6NIK2 292 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 PTPN14Q15678 1187 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 FCHSD1Q86WN1 690 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 CTNND2Q9UQB3 1225 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 NRDCO43847 1150 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 AOC3Q16853 763 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 TTBK2Q6IQ55 1244 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 TC2NQ8N9U0 490 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 LIMA1Q9UHB6 759 aaKnown RBP15.54■□□□□ 0.08
RTN3-210ENST00000540798 SLURP2P0DP57 97 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 FXR2P51116 673 aaKnown RBP eCLIP15.54■□□□□ 0.08
RTN3-210ENST00000540798 STX17P56962 302 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 KLHL10Q6JEL2 608 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 CABP7Q86V35 215 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
RTN3-210ENST00000540798 MMTAG2Q9BU76 263 aaKnown RBP15.54■□□□□ 0.08
RTN3-210ENST00000540798 KIF13BQ9NQT8 1826 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 KIF2AO00139 706 aaPredicted RBP15.53■□□□□ 0.08
RTN3-210ENST00000540798 ZBTB5O15062 677 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 RHOBTB3O94955 611 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 CACNB3P54284 484 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 PAK1Q13153 545 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 SIAH1Q8IUQ4 282 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 ADSSL1Q8N142 457 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 SUPT20HQ8NEM7 779 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 DCAF4Q8WV16 495 aa15.53■□□□□ 0.08
RTN3-210ENST00000540798 EZH2Q15910 746 aaKnown RBP15.53■□□□□ 0.08
RTN3-210ENST00000540798 TRMT1Q9NXH9 659 aaKnown RBP15.53■□□□□ 0.08
RTN3-210ENST00000540798 YDJCA8MPS7 323 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 ENTPD3O75355 529 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 PLCG1P19174 1290 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 PTPN21Q16825 1174 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 PPP4R3AQ6IN85 833 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 KANSL2Q9H9L4 492 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 MPHOSPH10O00566 681 aaKnown RBP15.52■□□□□ 0.08
RTN3-210ENST00000540798 PRCPP42785 496 aa15.52■□□□□ 0.08
RTN3-210ENST00000540798 CERKLQ49MI3 558 aaPredicted RBP15.52■□□□□ 0.08
RTN3-210ENST00000540798 GIMAP8Q8ND71 665 aaPredicted RBP15.52■□□□□ 0.08
RTN3-210ENST00000540798 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
RTN3-210ENST00000540798 USP17L10C9JJH3 530 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 TEX33O43247 280 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 TUBB4AP04350 444 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 EEF2P13639 858 aaKnown RBP15.52■□□□□ 0.07
RTN3-210ENST00000540798 KMT5BQ4FZB7 885 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 GRIPAP1Q4V328 841 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 NELFBQ8WX92 580 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 C7orf25Q9BPX7 421 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 STK32BQ9NY57 414 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 GDAQ9Y2T3 454 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.07
RTN3-210ENST00000540798 CCP110O43303 1012 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 TCP10Q12799 353 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
RTN3-210ENST00000540798 ARHGAP6O43182 974 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 SLC37A4O43826 429 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 STX10O60499 249 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 GOLGA8FQ08AF8 430 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 GOLGA8DPQ0D2H9 430 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 TMEM179Q6ZVK1 233 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 GMCL1P1Q8NEA9 526 aa15.51■□□□□ 0.07
RTN3-210ENST00000540798 TECP42680 631 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 PDIA5Q14554 519 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 SYCP1Q15431 976 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 COBLL1Q53SF7 1204 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 CUL5Q93034 780 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 COL4A5P29400 1685 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 FAM196BA6NMK8 535 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 SLC16A2P36021 539 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 SPAG1Q07617 926 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 CALCRLQ16602 461 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 PANX2Q96RD6 677 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 TRIM9Q9C026 710 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
RTN3-210ENST00000540798 TDP2O95551 362 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 RBM5P52756 815 aaKnown RBP eCLIP15.5■□□□□ 0.07
RTN3-210ENST00000540798 KRT31Q15323 416 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 REXO1L1PQ8IX06 675 aa15.5■□□□□ 0.07
RTN3-210ENST00000540798 H7C1D1 291 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 EN1Q05925 392 aaPredicted RBP15.49■□□□□ 0.07
RTN3-210ENST00000540798 GRB10Q13322 594 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 TCP11X2Q5H9J9 407 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 IRF2BP1Q8IU81 584 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 GMCL1Q96IK5 515 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 BAG1Q99933 345 aaPredicted RBP15.49■□□□□ 0.07
RTN3-210ENST00000540798 GLT8D2Q9H1C3 349 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms