RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CPVLQ9H3G5 476 aa19.7■□□□□ 0.74
DDB1-215ENST00000539712 TAF6LQ9Y6J9 622 aa19.7■□□□□ 0.74
DDB1-215ENST00000539712 LCTP09848 1927 aa19.7■□□□□ 0.74
DDB1-215ENST00000539712 RAD50Q92878 1312 aa19.7■□□□□ 0.74
DDB1-215ENST00000539712 MYADML2A6NDP7 307 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 NFIBO00712 420 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 CTAGE5O15320 804 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 TRIM60Q495X7 471 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 RNF180Q86T96 592 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 IQCA1Q86XH1 822 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 PNMA1Q8ND90 353 aa19.69■□□□□ 0.74
DDB1-215ENST00000539712 SGSM2O43147 1006 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 CCDC178Q5BJE1 867 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 CYB5R4Q7L1T6 521 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 MORC4Q8TE76 937 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 TSEN34Q9BSV6 310 aaKnown RBP19.68■□□□□ 0.74
DDB1-215ENST00000539712 KRT23Q9C075 422 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 UBA5Q9GZZ9 404 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 UPF3AQ9H1J1 476 aaKnown RBP19.68■□□□□ 0.74
DDB1-215ENST00000539712 ATP11BQ9Y2G3 1177 aa19.68■□□□□ 0.74
DDB1-215ENST00000539712 A0A1W2PQ45 241 aaPredicted RBP19.67■□□□□ 0.74
DDB1-215ENST00000539712 A0A1W2PQY0 241 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 CYP21A2P08686 494 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 ACLYP53396 1101 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 NKX3-2P78367 333 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 MDM2Q00987 491 aaPredicted RBP19.67■□□□□ 0.74
DDB1-215ENST00000539712 BAATQ14032 418 aaPredicted RBP19.67■□□□□ 0.74
DDB1-215ENST00000539712 SEC23AQ15436 765 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 GPATCH4Q5T3I0 446 aaKnown RBP19.67■□□□□ 0.74
DDB1-215ENST00000539712 NSMFQ6X4W1 530 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 CNNM2Q9H8M5 875 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 TNKSO95271 1327 aa19.67■□□□□ 0.74
DDB1-215ENST00000539712 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.66■□□□□ 0.74
DDB1-215ENST00000539712 ASB14A6NK59 587 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 PTGS1P23219 599 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 CST5P28325 142 aaPredicted RBP19.66■□□□□ 0.74
DDB1-215ENST00000539712 GJA9P57773 515 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 TLE2Q04725 743 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 KCNA10Q16322 511 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 TMEM63BQ5T3F8 832 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 TAPT1Q6NXT6 567 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 SH3RF1Q7Z6J0 888 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 RUFY2Q8WXA3 655 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 KAT14Q9H8E8 782 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 WDR19Q8NEZ3 1342 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 COL6A3P12111 3177 aa19.66■□□□□ 0.74
DDB1-215ENST00000539712 SLC30A10Q6XR72 485 aa19.65■□□□□ 0.74
DDB1-215ENST00000539712 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
DDB1-215ENST00000539712 LRCH3Q96II8 777 aa19.65■□□□□ 0.74
DDB1-215ENST00000539712 UBE2OQ9C0C9 1292 aaKnown RBP19.65■□□□□ 0.74
DDB1-215ENST00000539712 PDLIM7Q9NR12 457 aa19.65■□□□□ 0.74
DDB1-215ENST00000539712 PDGFCQ9NRA1 345 aa19.65■□□□□ 0.74
DDB1-215ENST00000539712 GNEQ9Y223 722 aaKnown RBP19.65■□□□□ 0.74
DDB1-215ENST00000539712 TRIM43BA6NCK2 446 aa19.64■□□□□ 0.73
DDB1-215ENST00000539712 STOX1Q6ZVD7 989 aa19.64■□□□□ 0.73
DDB1-215ENST00000539712 ADGRF4Q8IZF3 695 aa19.64■□□□□ 0.73
DDB1-215ENST00000539712 TDHQ8IZJ6 230 aa19.64■□□□□ 0.73
DDB1-215ENST00000539712 MAP4K1Q92918 833 aa19.64■□□□□ 0.73
DDB1-215ENST00000539712 TRIM43Q96BQ3 446 aaPredicted RBP19.64■□□□□ 0.73
DDB1-215ENST00000539712 LRRC37A2A6NM11 1700 aa19.64■□□□□ 0.73
DDB1-215ENST00000539712 LTBP2Q14767 1821 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 MOXD2PA6NHM9 499 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 C6orf222P0C671 652 aaPredicted RBP19.63■□□□□ 0.73
DDB1-215ENST00000539712 SMPD1P17405 629 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 ITGB8P26012 769 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 TNFAIP2Q03169 654 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 ASPRV1Q53RT3 343 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 STAG2Q8N3U4 1231 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 UBAC1Q9BSL1 405 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 SENP2Q9HC62 589 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 PNMA2Q9UL42 364 aa19.63■□□□□ 0.73
DDB1-215ENST00000539712 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
DDB1-215ENST00000539712 ALDH5A1P51649 535 aaPredicted RBP19.62■□□□□ 0.73
DDB1-215ENST00000539712 RPS6P62753 249 aaKnown RBP19.62■□□□□ 0.73
DDB1-215ENST00000539712 CDC37Q16543 378 aaPredicted RBP19.62■□□□□ 0.73
DDB1-215ENST00000539712 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
DDB1-215ENST00000539712 LRIT3Q3SXY7 679 aa19.62■□□□□ 0.73
DDB1-215ENST00000539712 EEPD1Q7L9B9 569 aa19.62■□□□□ 0.73
DDB1-215ENST00000539712 ANKRD33Q7Z3H0 272 aa19.62■□□□□ 0.73
DDB1-215ENST00000539712 FBXO16Q8IX29 292 aaPredicted RBP19.62■□□□□ 0.73
DDB1-215ENST00000539712 TBC1D5Q92609 795 aa19.62■□□□□ 0.73
DDB1-215ENST00000539712 JMJD4Q9H9V9 463 aa19.62■□□□□ 0.73
DDB1-215ENST00000539712 PTPDC1A2A3K4 754 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 E7EWF7 191 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 ASGR1P07306 291 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 PARP1P09874 1014 aaKnown RBP19.61■□□□□ 0.73
DDB1-215ENST00000539712 CALML3P27482 149 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 CDK7P50613 346 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 GNASQ5JWF2 1037 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
DDB1-215ENST00000539712 IQSEC1Q6DN90 963 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 RNF207Q6ZRF8 634 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 RGS22Q8NE09 1264 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 VTA1Q9NP79 307 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 STARD7Q9NQZ5 370 aa19.61■□□□□ 0.73
DDB1-215ENST00000539712 ADD3Q9UEY8 706 aaKnown RBP19.61■□□□□ 0.73
DDB1-215ENST00000539712 ELP1O95163 1332 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 LOC102724159A0A0B4J2E5 919 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 EDNRBP24530 442 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 BEX3Q00994 111 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms