RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 NSMFQ6X4W1 530 aa13.52□□□□□ -0.25
RTN3-209ENST00000538995 KIAA1211Q6ZU35 1233 aa13.52□□□□□ -0.25
RTN3-209ENST00000538995 TSEN34Q9BSV6 310 aaKnown RBP13.52□□□□□ -0.25
RTN3-209ENST00000538995 KATNBL1Q9H079 304 aa13.52□□□□□ -0.25
RTN3-209ENST00000538995 ASTN1O14525 1302 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 SYNRGQ9UMZ2 1314 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 NFIBO00712 420 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 GOLGA8HP0CJ92 632 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 CST5P28325 142 aaPredicted RBP13.51□□□□□ -0.25
RTN3-209ENST00000538995 BMP8BP34820 402 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
RTN3-209ENST00000538995 CYB5R4Q7L1T6 521 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 MORC4Q8TE76 937 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 CLEC4DQ8WXI8 215 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 GDF15Q99988 308 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 SPC25Q9HBM1 224 aa13.51□□□□□ -0.25
RTN3-209ENST00000538995 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
RTN3-209ENST00000538995 ADD3Q9UEY8 706 aaKnown RBP13.51□□□□□ -0.25
RTN3-209ENST00000538995 ZMYND8Q9ULU4 1186 aaPredicted RBP13.51□□□□□ -0.25
RTN3-209ENST00000538995 RBM8AQ9Y5S9 174 aaKnown RBP13.51□□□□□ -0.25
RTN3-209ENST00000538995 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 ERICH2A1L162 156 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 MOXD2PA6NHM9 499 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 E7EWF7 191 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 PGK1P00558 417 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
RTN3-209ENST00000538995 ADCYAP1R1P41586 468 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
RTN3-209ENST00000538995 RTP1P59025 263 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 NKX3-2P78367 333 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
RTN3-209ENST00000538995 CCDC144BQ3MJ40 725 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 SLC39A5Q6ZMH5 540 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 KLHDC9Q8NEP7 349 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 LENG1Q96BZ8 264 aaPredicted RBP13.5□□□□□ -0.25
RTN3-209ENST00000538995 ESYT1Q9BSJ8 1104 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 MTA3Q9BTC8 594 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 UBA5Q9GZZ9 404 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
RTN3-209ENST00000538995 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
RTN3-209ENST00000538995 ABCB11O95342 1321 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
RTN3-209ENST00000538995 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 PTPDC1A2A3K4 754 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
RTN3-209ENST00000538995 FXR1P51114 621 aaKnown RBP eCLIP13.49□□□□□ -0.25
RTN3-209ENST00000538995 GJA9P57773 515 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
RTN3-209ENST00000538995 BAATQ14032 418 aaPredicted RBP13.49□□□□□ -0.25
RTN3-209ENST00000538995 RNF207Q6ZRF8 634 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 ADGRF4Q8IZF3 695 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 DNERQ8NFT8 737 aa13.49□□□□□ -0.25
RTN3-209ENST00000538995 MPHOSPH6Q99547 160 aaKnown RBP13.49□□□□□ -0.25
RTN3-209ENST00000538995 LSG1Q9H089 658 aaKnown RBP13.49□□□□□ -0.25
RTN3-209ENST00000538995 ADCY6O43306 1168 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 SYN1P17600 705 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 MAGEA10P43363 369 aaPredicted RBP13.48□□□□□ -0.25
RTN3-209ENST00000538995 ALDH5A1P51649 535 aaPredicted RBP13.48□□□□□ -0.25
RTN3-209ENST00000538995 RPS6P62753 249 aaKnown RBP13.48□□□□□ -0.25
RTN3-209ENST00000538995 CCSAPQ6IQ19 270 aaPredicted RBP13.48□□□□□ -0.25
RTN3-209ENST00000538995 CASC1Q6TDU7 716 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
RTN3-209ENST00000538995 PCSK9Q8NBP7 692 aaKnown RBP13.48□□□□□ -0.25
RTN3-209ENST00000538995 NUP133Q8WUM0 1156 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
RTN3-209ENST00000538995 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 PALM3A6NDB9 673 aaPredicted RBP13.47□□□□□ -0.25
RTN3-209ENST00000538995 B4DLN1 442 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 DHX16O60231 1041 aaKnown RBP13.47□□□□□ -0.25
RTN3-209ENST00000538995 C6orf222P0C671 652 aaPredicted RBP13.47□□□□□ -0.25
RTN3-209ENST00000538995 EDNRBP24530 442 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 CALML3P27482 149 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
RTN3-209ENST00000538995 ACLYP53396 1101 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 TRAF1Q13077 416 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 GRM4Q14833 912 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 WTAPQ15007 396 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 QRICH1Q2TAL8 776 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 USH1GQ495M9 461 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 IQSEC1Q6DN90 963 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 FBXO11Q86XK2 927 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 FERMT2Q96AC1 680 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 GNEQ9Y223 722 aaKnown RBP13.47□□□□□ -0.25
RTN3-209ENST00000538995 ATP11BQ9Y2G3 1177 aa13.47□□□□□ -0.25
RTN3-209ENST00000538995 MRPL11Q9Y3B7 192 aaKnown RBP13.47□□□□□ -0.25
RTN3-209ENST00000538995 Q9Y3F1 56 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms