RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 C4orf32Q8N8J7 132 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 MRPL44Q9H9J2 332 aaKnown RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 CYP2D6P10635 497 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 TXLNAP40222 546 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 GNAQP50148 359 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 EVX2Q03828 476 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 PAK1Q13153 545 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 PNMA8AQ86V59 439 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 MICALL2Q8IY33 904 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 ANKRD20A12PQ8NF67 263 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 DESI2Q9BSY9 194 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 CNOT7Q9UIV1 285 aaKnown RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
CDCA3-207ENST00000538862 SEMA3FQ13275 785 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 TUBB2AQ13885 445 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 TRIM14Q14142 442 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 MTF1Q14872 753 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 RAD9BQ6WBX8 426 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 CREBRFQ8IUR6 639 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 RABGGTAQ92696 567 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 MTRQ99707 1265 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 TUBB2BQ9BVA1 445 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 BLZF1Q9H2G9 400 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
CDCA3-207ENST00000538862 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
CDCA3-207ENST00000538862 GYPCP04921 128 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 CASP14P31944 242 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 KARSQ15046 597 aaKnown RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 KRT31Q15323 416 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 C12orf60Q5U649 245 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 GALNT17Q6IS24 598 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 TMTC1Q8IUR5 882 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 STAMQ92783 540 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 TCP11L1Q9NUJ3 509 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 ZNF646O15015 1829 aaPredicted RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 IRS2Q9Y4H2 1338 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 KIF5CO60282 957 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 EGFRP00533 1210 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 VIL1P09327 827 aaKnown RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 TFAP4Q01664 338 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 GRM4Q14833 912 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 CPLX3Q8WVH0 158 aa16.37■□□□□ 0.21
CDCA3-207ENST00000538862 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
CDCA3-207ENST00000538862 H7C1D1 291 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 M0R2N6 131 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 N4BP3O15049 544 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 RPN1P04843 607 aaKnown RBP16.36■□□□□ 0.21
CDCA3-207ENST00000538862 MYL1P05976 194 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 APLP1P51693 650 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 COPB1P53618 953 aaKnown RBP16.36■□□□□ 0.21
CDCA3-207ENST00000538862 HIRAP54198 1017 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-207ENST00000538862 TUBB4BP68371 445 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 ZNF771Q7L3S4 317 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-207ENST00000538862 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
CDCA3-207ENST00000538862 PNMA1Q8ND90 353 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 IL17RBQ9NRM6 502 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
CDCA3-207ENST00000538862 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 STAT6P42226 847 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-207ENST00000538862 TCP11X2Q5H9J9 407 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 RBM26Q5T8P6 1007 aaKnown RBP16.35■□□□□ 0.21
CDCA3-207ENST00000538862 USP50Q70EL3 339 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-207ENST00000538862 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 COA1Q9GZY4 146 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 PCNTO95613 3336 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 POLR2AP24928 1970 aaKnown RBP16.35■□□□□ 0.21
CDCA3-207ENST00000538862 USP17L3A6NCW0 530 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 USP17L4A6NCW7 530 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 KCNJ18B7U540 433 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 LAD1O00515 517 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 ADAMTS3O15072 1205 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 FXR1P51114 621 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDCA3-207ENST00000538862 KCNJ12Q14500 433 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 WWC2Q6AWC2 1192 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 RSBN1LQ6PCB5 846 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-207ENST00000538862 DTHD1Q6ZMT9 781 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 USP17L1Q7RTZ2 530 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 DISC1Q9NRI5 854 aa16.35■□□□□ 0.21
CDCA3-207ENST00000538862 FAM205AQ6ZU69 1335 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 MYH8P13535 1937 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 ITGBL1O95965 494 aaPredicted RBP16.34■□□□□ 0.21
CDCA3-207ENST00000538862 CCT6AP40227 531 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 347.8 ms