RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	MCM3AP	O60318	1980 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	DUSP11	O75319	330 aa	Known RBP	14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	GHRHR	Q02643	423 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ACVR2B	Q13705	512 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	KRT32	Q14532	448 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	GRM4	Q14833	912 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MUM1L1	Q5H9M0	696 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	C1orf53	Q5VUE5	145 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ARMCX2	Q7L311	632 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ADGRF4	Q8IZF3	695 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	DIS3L	Q8TF46	1054 aa	Known RBP	14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CLEC4D	Q8WXI8	215 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	DPF3	Q92784	378 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MPHOSPH6	Q99547	160 aa	Known RBP	14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TSEN34	Q9BSV6	310 aa	Known RBP	14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	RIOX1	Q9H6W3	641 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	HOMER2	Q9NSB8	354 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MAD2L2	Q9UI95	211 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ABCB11	O95342	1321 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MYH6	P13533	1939 aa		14.35	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SOWAHB	A6NEL2	793 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828		B4DLN1	442 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	KBTBD13	C9JR72	458 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	KLRF2	D3W0D1	207 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	EVI5	O60447	810 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	DDAH1	O94760	285 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CST5	P28325	142 aa	Predicted RBP	14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SLC4A3	P48751	1232 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MRPL12	P52815	198 aa	Known RBP	14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ANTXR2	P58335	489 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CDC37	Q16543	378 aa	Predicted RBP	14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TMEM67	Q5HYA8	995 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	PRAMEF19	Q5SWL8	479 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CATIP	Q7Z7H3	387 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	RNF180	Q86T96	592 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MCF2L2	Q86YR7	1114 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CCDC144CP	Q8IYA2	1237 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	KCNB2	Q92953	911 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	LZTS2	Q9BRK4	669 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	UBA5	Q9GZZ9	404 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	KATNBL1	Q9H079	304 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	JMJD4	Q9H9V9	463 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MRPL11	Q9Y3B7	192 aa	Known RBP	14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828		Q9Y3F1	56 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TAF6L	Q9Y6J9	622 aa		14.34	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ALPK3	Q96L96	1907 aa		14.33	□□□□□ -0.11
CLTCL1-205	ENST00000538828	HMGB1	P09429	215 aa	Known RBP	14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	GOLGA8H	P0CJ92	632 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	CALM1	P0DP23	149 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	CALM2	P0DP24	149 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	CALM3	P0DP25	149 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	KIF5B	P33176	963 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	GNAQ	P50148	359 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	CNTN2	Q02246	1040 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	LRRC41	Q15345	812 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	IQSEC1	Q6DN90	963 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	NSMF	Q6X4W1	530 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	RNF207	Q6ZRF8	634 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SGMS1	Q86VZ5	419 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	FBXO11	Q86XK2	927 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	LY9	Q9HBG7	655 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	VTA1	Q9NP79	307 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	XPNPEP3	Q9NQH7	507 aa		14.33	□□□□□ -0.12
CLTCL1-205	ENST00000538828	MOXD2P	A6NHM9	499 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	NFIB	O00712	420 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	ZBTB5	O15062	677 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	PRC1	O43663	620 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	ADAMTS4	O75173	837 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	REC8	O95072	547 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	TAL1	P17542	331 aa	Predicted RBP	14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	EDNRB	P24530	442 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SNAP25	P60880	206 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	RPS6	P62753	249 aa	Known RBP	14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	BAAT	Q14032	418 aa	Predicted RBP	14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SNX17	Q15036	470 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	QRICH1	Q2TAL8	776 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	KLHDC9	Q8NEP7	349 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	CHMP4C	Q96CF2	233 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	AMN	Q9BXJ7	453 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	UPF3A	Q9H1J1	476 aa	Known RBP	14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SPC25	Q9HBM1	224 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	PHF24	Q9UPV7	400 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828	LCT	P09848	1927 aa		14.32	□□□□□ -0.12
CLTCL1-205	ENST00000538828		A0A1W2PPC1	479 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828		H0YGN5	161 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SH2B2	O14492	632 aa	Predicted RBP	14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	ALDH5A1	P51649	535 aa	Predicted RBP	14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	RCAN1	P53805	252 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	GJA9	P57773	515 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	CCDC144B	Q3MJ40	725 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	TEX2	Q8IWB9	1127 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	STAG2	Q8N3U4	1231 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	FBXL16	Q8N461	479 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	PCSK9	Q8NBP7	692 aa	Known RBP	14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	NEK1	Q96PY6	1258 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SPZ1	Q9BXG8	430 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	SEZ6L	Q9BYH1	1024 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	ASTN1	O14525	1302 aa		14.31	□□□□□ -0.12
CLTCL1-205	ENST00000538828	BAZ2B	Q9UIF8	2168 aa	Known RBP	14.3	□□□□□ -0.12
CLTCL1-205	ENST00000538828	DNAH12	Q6ZR08	3092 aa		14.3	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms