RNA–Protein interactions for RNA: ENST00000538621.2

PACSIN1-206, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-206ENST00000538621 HGSO14964 777 aaPredicted RBP12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 HARSP12081 509 aaKnown RBP12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 TPH2Q8IWU9 490 aa12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 MYOCDQ8IZQ8 938 aa12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 DNM3Q9UQ16 869 aa12.15□□□□□ -0.46
PACSIN1-206ENST00000538621 MROH7-TTC4A0A0A0MT08 1334 aa12.15□□□□□ -0.47
PACSIN1-206ENST00000538621 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 TUBBP07437 444 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 ITPK1Q13572 414 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 SFMBT2Q5VUG0 894 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 HAUS4Q9H6D7 363 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 NDUFAB1O14561 156 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 PLCG1P19174 1290 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 PSEN1P49768 467 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 E4F1Q66K89 784 aaPredicted RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 RABGGTAQ92696 567 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 ST7Q9NRC1 585 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 DDX41Q9UJV9 622 aaKnown RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 PPP1R2P41236 205 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 TUBB4BP68371 445 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 CCZ1BP86790 482 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 CCZ1P86791 482 aaPredicted RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 MICALCLQ6ZW33 695 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 CCDC91Q7Z6B0 441 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 GJA10Q969M2 543 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 COL15A1P39059 1388 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 NRXN3Q9Y4C0 1643 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 CCDC172P0C7W6 258 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 PNMA6AP0CW24 399 aaPredicted RBP12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 UBXN2AP68543 259 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 BRD3Q15059 726 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 UBE2SQ16763 222 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 FAM26FQ5R3K3 315 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 KIAA1024Q9UPX6 916 aa12.14□□□□□ -0.47
PACSIN1-206ENST00000538621 ATP1A2P50993 1020 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 CYP2J2P51589 502 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 RASSF7Q02833 373 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 GPATCH11Q8N954 259 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 TRPC5Q9UL62 973 aaPredicted RBP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 CPDO75976 1380 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 PHLPP2Q6ZVD8 1323 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 TRIM28Q13263 835 aaKnown RBP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 LMBR1Q8WVP7 490 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 WDR24Q96S15 920 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 CCDC169A6NNP5 214 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 PABPC4Q13310 644 aaKnown RBP eCLIP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 LLGL1Q15334 1064 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 NAA35Q5VZE5 725 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 CCDC50Q8IVM0 306 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 OTUD6BQ8N6M0 293 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 IGDCC4Q8TDY8 1250 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 PCDHA1Q9Y5I3 950 aa12.13□□□□□ -0.47
PACSIN1-206ENST00000538621 MEIS1O00470 390 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 EXOC3O60645 756 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 PLCB3Q01970 1234 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 PPP4R3AQ6IN85 833 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 DAAM2Q86T65 1068 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 UTYO14607 1347 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 KCNK3O14649 394 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 SRGAP2O75044 1071 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 MFAP3LO75121 409 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 CPLX4Q7Z7G2 160 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 LARP4BQ92615 738 aaKnown RBP12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 DCP1AQ9NPI6 582 aaPredicted RBP12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 PANK4Q9NVE7 773 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 SERPINB2P05120 415 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 TNFAIP3P21580 790 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 CACNB3P54284 484 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 EHHADHQ08426 723 aa12.12□□□□□ -0.47
PACSIN1-206ENST00000538621 TRAF1Q13077 416 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms