RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CCND2P30279 289 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 CACYBPQ9HB71 228 aaKnown RBP12.3□□□□□ -0.44
LINC00346-201ENST00000538077 RABGAP1Q9Y3P9 1069 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 RIMBP3CA6NJZ7 1639 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 RIMBP3BA6NNM3 1639 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 RIMBP3Q9UFD9 1639 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 C21orf2O43822 256 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 LACTBP83111 547 aaPredicted RBP12.3□□□□□ -0.44
LINC00346-201ENST00000538077 GABPB2Q8TAK5 448 aaPredicted RBP12.3□□□□□ -0.44
LINC00346-201ENST00000538077 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
LINC00346-201ENST00000538077 UBE2SQ16763 222 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 MIS18BP1Q6P0N0 1132 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 SRGAP1Q7Z6B7 1085 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 COA7Q96BR5 231 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 AMFRQ9UKV5 643 aa12.3□□□□□ -0.44
LINC00346-201ENST00000538077 ADCY8P40145 1251 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 LRRC41Q15345 812 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 PARD3BQ8TEW8 1205 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 PRPF31Q8WWY3 499 aaKnown RBP12.29□□□□□ -0.44
LINC00346-201ENST00000538077 IRAK4Q9NWZ3 460 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 MYL7Q01449 175 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 PLCB4Q15147 1175 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 ELF2Q15723 593 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 THAP12O43422 761 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 PI16Q6UXB8 463 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 SMYD2Q9NRG4 433 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 RPN1P04843 607 aaKnown RBP12.29□□□□□ -0.44
LINC00346-201ENST00000538077 NEDD9Q14511 834 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 RFX6Q8HWS3 928 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 STK25O00506 426 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 GNA14O95837 355 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 CACNB3P54284 484 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 ADAM9Q13443 819 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 PIGSQ96S52 555 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 DPH5Q9H2P9 285 aa12.29□□□□□ -0.44
LINC00346-201ENST00000538077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
LINC00346-201ENST00000538077 INO80B-WBP1J3KQ70 363 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 CLIC2O15247 247 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 HOXA13P31271 388 aaPredicted RBP12.28□□□□□ -0.44
LINC00346-201ENST00000538077 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 CEP128Q6ZU80 1094 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 ZNF653Q96CK0 615 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 INO80BQ9C086 356 aaPredicted RBP12.28□□□□□ -0.44
LINC00346-201ENST00000538077 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
LINC00346-201ENST00000538077 ANTXR1Q9H6X2 564 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
LINC00346-201ENST00000538077 ATP11AP98196 1134 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 TAOK1Q7L7X3 1001 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 BTBD18B2RXH4 712 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 STAT1P42224 750 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 NAA35Q5VZE5 725 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 HESX1Q9UBX0 185 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 DDAH1O94760 285 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 TTLL1O95922 423 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 SCRN1Q12765 414 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 DENND2CQ68D51 928 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 TRIM56Q9BRZ2 755 aaKnown RBP12.28□□□□□ -0.44
LINC00346-201ENST00000538077 TFDP1Q14186 410 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 MTERF2Q49AM1 385 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 ODR4Q5SWX8 454 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 LCORLQ8N3X6 602 aa12.28□□□□□ -0.44
LINC00346-201ENST00000538077 BNIP3LO60238 219 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 PTGDRQ13258 359 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 CFAP221Q4G0U5 840 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 SCARA5Q6ZMJ2 495 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 CCDC13Q8IYE1 715 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 ANKRD36BP1Q96IX9 119 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 ZSCAN20P17040 1043 aaPredicted RBP12.27□□□□□ -0.44
LINC00346-201ENST00000538077 CASP2P42575 452 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 SH2D4BQ5SQS7 431 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 MICAL1Q8TDZ2 1067 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.44
LINC00346-201ENST00000538077 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 GTF2A1P52655 376 aaPredicted RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 HADHQ16836 314 aaKnown RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 GBP6Q6ZN66 633 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 SMYD4Q8IYR2 804 aaPredicted RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 CCNA1P78396 465 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 TMTC1Q8IUR5 882 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 CCDC170Q8IYT3 715 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 SNX25Q9H3E2 840 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 A6NJR5 290 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 MYSM1Q5VVJ2 828 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 KMT5AQ9NQR1 393 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms