RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 IQCA1Q86XH1 822 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 UPF3AQ9H1J1 476 aaKnown RBP17.52■□□□□ 0.4
LRRK1-211ENST00000538064 IL25Q9H293 177 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 PDLIM7Q9NR12 457 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 PNMA2Q9UL42 364 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
LRRK1-211ENST00000538064 MOXD2PA6NHM9 499 aa17.51■□□□□ 0.39
LRRK1-211ENST00000538064 ASB14A6NK59 587 aa17.51■□□□□ 0.39
LRRK1-211ENST00000538064 CCDC144BQ3MJ40 725 aa17.51■□□□□ 0.39
LRRK1-211ENST00000538064 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
LRRK1-211ENST00000538064 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
LRRK1-211ENST00000538064 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
LRRK1-211ENST00000538064 MYADML2A6NDP7 307 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 B4E1Z4 1266 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 ACLYP53396 1101 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 CCSAPQ6IQ19 270 aaPredicted RBP17.5■□□□□ 0.39
LRRK1-211ENST00000538064 NSMFQ6X4W1 530 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 ANKS1AQ92625 1134 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 LRCH3Q96II8 777 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 CNNM2Q9H8M5 875 aa17.5■□□□□ 0.39
LRRK1-211ENST00000538064 PRDM5Q9NQX1 630 aaPredicted RBP17.5■□□□□ 0.39
LRRK1-211ENST00000538064 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-211ENST00000538064 GJA9P57773 515 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 NKX3-2P78367 333 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 NUP133Q8WUM0 1156 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 ZSCAN10Q96SZ4 725 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-211ENST00000538064 KRT23Q9C075 422 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 SPC25Q9HBM1 224 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 STARD7Q9NQZ5 370 aa17.49■□□□□ 0.39
LRRK1-211ENST00000538064 TNKSO95271 1327 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 NFIBO00712 420 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 TLE2Q04725 743 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
LRRK1-211ENST00000538064 KCNA10Q16322 511 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 GPR153Q6NV75 609 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
LRRK1-211ENST00000538064 PCSK9Q8NBP7 692 aaKnown RBP17.48■□□□□ 0.39
LRRK1-211ENST00000538064 MORC4Q8TE76 937 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 KAT14Q9H8E8 782 aa17.48■□□□□ 0.39
LRRK1-211ENST00000538064 ELP1O95163 1332 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.47■□□□□ 0.39
LRRK1-211ENST00000538064 TRIM43BA6NCK2 446 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 PQBP1O60828 265 aaKnown RBP17.47■□□□□ 0.39
LRRK1-211ENST00000538064 CLTBP09497 229 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 TNFAIP2Q03169 654 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 ANKRD33Q7Z3H0 272 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 FBXO16Q8IX29 292 aaPredicted RBP17.47■□□□□ 0.39
LRRK1-211ENST00000538064 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 CLEC4DQ8WXI8 215 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 TRIM43Q96BQ3 446 aaPredicted RBP17.47■□□□□ 0.39
LRRK1-211ENST00000538064 VTA1Q9NP79 307 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
LRRK1-211ENST00000538064 ADD3Q9UEY8 706 aaKnown RBP17.47■□□□□ 0.39
LRRK1-211ENST00000538064 PTPDC1A2A3K4 754 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 CTAGE5O15320 804 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 ASGR1P07306 291 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 CHMLP26374 656 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 IRX5P78411 483 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 SH3RF1Q7Z6J0 888 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 TLK2Q86UE8 772 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 GLT1D1Q96MS3 346 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 TOX2Q96NM4 488 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 PURBQ96QR8 312 aaKnown RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 UBAC1Q9BSL1 405 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 GNEQ9Y223 722 aaKnown RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 DDX49Q9Y6V7 483 aaKnown RBP17.46■□□□□ 0.39
LRRK1-211ENST00000538064 KIAA1217Q5T5P2 1943 aa17.46■□□□□ 0.39
LRRK1-211ENST00000538064 MROH7Q68CQ1 1323 aa17.46■□□□□ 0.38
LRRK1-211ENST00000538064 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
LRRK1-211ENST00000538064 GNASQ5JWF2 1037 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 TAPT1Q6NXT6 567 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 RNF207Q6ZRF8 634 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 BADQ92934 168 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
LRRK1-211ENST00000538064 A0A0U1RQG5 324 aaPredicted RBP17.44■□□□□ 0.38
LRRK1-211ENST00000538064 SMPD1P17405 629 aa17.44■□□□□ 0.38
LRRK1-211ENST00000538064 NOL8Q76FK4 1167 aaKnown RBP17.44■□□□□ 0.38
LRRK1-211ENST00000538064 CPVLQ9H3G5 476 aa17.44■□□□□ 0.38
LRRK1-211ENST00000538064 DCDC2CA8MYV0 355 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 SGSM2O43147 1006 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 CYP21A2P08686 494 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
LRRK1-211ENST00000538064 CALML3P27482 149 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 RPS6P62753 249 aaKnown RBP17.43■□□□□ 0.38
LRRK1-211ENST00000538064 FAAP100Q0VG06 881 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 SEC23AQ15436 765 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 USH1GQ495M9 461 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
LRRK1-211ENST00000538064 IQSEC1Q6DN90 963 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms