RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 EMBQ6PCB8 327 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 PA2G4Q9UQ80 394 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 PMS1P54277 932 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 PTPRGP23470 1445 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 PAX7P23759 505 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 BIRC3Q13489 604 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ZNF827Q17R98 1081 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 WDR44Q5JSH3 913 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 TRIM56Q9BRZ2 755 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 EEF1GP26641 437 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 RUNDC3BQ96NL0 473 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 GSTA4O15217 222 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CD2BP2O95400 341 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ABCB4P21439 1286 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 C1orf146Q5VVC0 180 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 DCUN1D2Q6PH85 259 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CARD10Q9BWT7 1032 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CRNKL1Q9BZJ0 848 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ANKRD2Q9GZV1 360 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 MLXIPLQ9NP71 852 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 DBF4Q9UBU7 674 aaPredicted RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 FBXO2Q9UK22 296 aaPredicted RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 STX8Q9UNK0 236 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CFLARO15519 480 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CALUO43852 315 aaPredicted RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 DAB1O75553 588 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 PANX2Q96RD6 677 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 C10orf88Q9H8K7 445 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 EHD2Q9NZN4 543 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 PLS3P13797 630 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 DMPKQ09013 629 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CUL4BQ13620 913 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ZBTB41Q5SVQ8 909 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ICA1LQ8NDH6 482 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 KIFC3Q9BVG8 833 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CD248Q9HCU0 757 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 GYG2O15488 501 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 KCNA3P22001 575 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 TCP11X2Q5H9J9 407 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 BEND6Q5SZJ8 279 aaPredicted RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 EPN3Q9H201 632 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 C6orf50Q9HD87 102 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 RASGRF2O14827 1237 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 MMEP08473 750 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 NDUFA8P51970 172 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 KLC1Q07866 573 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 TRIM42Q8IWZ5 723 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 TRIML2Q8N7C3 387 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 C8orf58Q8NAV2 365 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 RAPGEF5Q92565 580 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 COBLO75128 1261 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 GUCY1A3Q02108 690 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 MRPL28Q13084 256 aaKnown RBP6.17□□□□□ -1.42
CSMD1-215ENST00000537824 NCAPH2Q6IBW4 605 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 TTC6Q86TZ1 520 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 DCLK2Q8N568 766 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ING2Q9H160 280 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 SERTAD1Q9UHV2 236 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 CYP7A1P22680 504 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 ANKIB1Q9P2G1 1089 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 SHANK1Q9Y566 2161 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 MAGOHP61326 146 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 DRP2Q13474 957 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 TOGARAM2Q6ZUX3 1019 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 MAGOHBQ96A72 148 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 TYW1Q9NV66 732 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 GMNCA6NCL1 334 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 TOM1L1O75674 476 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 RPN1P04843 607 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 GPTP24298 496 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 TPP2P29144 1249 aaPredicted RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ME3Q16798 604 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 KIAA0825Q8IV33 1275 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 CEP19Q96LK0 163 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 MYO1FO00160 1098 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ADCY1Q08828 1119 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 DPCR1Q3MIW9 517 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 GABPAQ06546 454 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 NSD2O96028 1365 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ESRRAP11474 423 aaPredicted RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 CRYMQ14894 314 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ANO5Q75V66 913 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ZRANB2O95218 330 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 MPRIPQ6WCQ1 1025 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 JPH4Q96JJ6 628 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 SH3GL2Q99962 352 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 BATF3Q9NR55 127 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 INTS1Q8N201 2190 aaKnown RBP6.16□□□□□ -1.42
CSMD1-215ENST00000537824 ACSL3O95573 720 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 CASP14P31944 242 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 CASP2P42575 452 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 IL1RL1Q01638 556 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 TRAIPQ9BWF2 469 aa6.16□□□□□ -1.42
CSMD1-215ENST00000537824 EPC1Q9H2F5 836 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms