RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 USP17L7P0C7H9 530 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 IL6STP40189 918 aaPredicted RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 EIF4A2Q14240 407 aaKnown RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 ADGRE1Q14246 886 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 TAF1CQ15572 869 aaPredicted RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 NKAPLQ5M9Q1 402 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 SNX29Q8TEQ0 813 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 LENG1Q96BZ8 264 aaPredicted RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 NSUN5Q96P11 429 aaKnown RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 NOP58Q9Y2X3 529 aaKnown RBP10.08□□□□□ -0.8
LMO3-216ENST00000537568 SSC5DA1L4H1 1573 aa10.08□□□□□ -0.8
LMO3-216ENST00000537568 PKD1L2Q7Z442 2459 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 J3QW42 95 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 PSMD14O00487 310 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 GIPC1O14908 333 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 PHACTR2O75167 634 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 POLR3DP05423 398 aaPredicted RBP10.07□□□□□ -0.8
LMO3-216ENST00000537568 PSAPP07602 524 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 GJA8P48165 433 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 SP3Q02447 781 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 KIAA2012Q0VF49 1180 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 PRAMEF18Q5VWM3 479 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 TDHQ8IZJ6 230 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 TTC9Q92623 222 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 ZSWIM4Q9H7M6 989 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 FNDC3AQ9Y2H6 1198 aaKnown RBP10.07□□□□□ -0.8
LMO3-216ENST00000537568 ZFHX4Q86UP3 3567 aa10.07□□□□□ -0.8
LMO3-216ENST00000537568 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
LMO3-216ENST00000537568 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
LMO3-216ENST00000537568 A1BGP04217 495 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 KIF4BQ2VIQ3 1234 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 MCF2L2Q86YR7 1114 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 WFDC8Q8IUA0 241 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
LMO3-216ENST00000537568 CDX2Q99626 313 aaPredicted RBP10.06□□□□□ -0.8
LMO3-216ENST00000537568 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.06□□□□□ -0.8
LMO3-216ENST00000537568 ZFYVE28Q9HCC9 887 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 NPHS2Q9NP85 383 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 FAM8A1Q9UBU6 413 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
LMO3-216ENST00000537568 MYBBP1AQ9BQG0 1328 aaKnown RBP10.06□□□□□ -0.8
LMO3-216ENST00000537568 ALPK3Q96L96 1907 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
LMO3-216ENST00000537568 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 GADD45BO75293 160 aaPredicted RBP10.05□□□□□ -0.8
LMO3-216ENST00000537568 STARD3NLO95772 234 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 SOX18P35713 384 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 PAK2Q13177 524 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 ANGEL2Q5VTE6 544 aaKnown RBP10.05□□□□□ -0.8
LMO3-216ENST00000537568 NXPE4Q6UWF7 544 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 TPTE2Q6XPS3 522 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 FAM9BQ8IZU0 186 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 DTWD1Q8N5C7 304 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
LMO3-216ENST00000537568 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 PIF1Q9H611 641 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 KCNQ5Q9NR82 932 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 UBR2Q8IWV8 1755 aa10.05□□□□□ -0.8
LMO3-216ENST00000537568 RTL9Q8NET4 1388 aa10.04□□□□□ -0.8
LMO3-216ENST00000537568 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
LMO3-216ENST00000537568 NRG1Q02297 640 aaPredicted RBP10.04□□□□□ -0.8
LMO3-216ENST00000537568 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
LMO3-216ENST00000537568 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
LMO3-216ENST00000537568 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
LMO3-216ENST00000537568 PLD4Q96BZ4 506 aa10.04□□□□□ -0.8
LMO3-216ENST00000537568 FARP2O94887 1054 aaPredicted RBP10.03□□□□□ -0.8
LMO3-216ENST00000537568 GJB1P08034 283 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 MAGEA10P43363 369 aaPredicted RBP10.03□□□□□ -0.8
LMO3-216ENST00000537568 RBL2Q08999 1139 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 C1orf141Q5JVX7 400 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 XP32Q5T750 250 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 PDE12Q6L8Q7 609 aaKnown RBP10.03□□□□□ -0.8
LMO3-216ENST00000537568 XKR5Q6UX68 686 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 USP34Q70CQ2 3546 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 FBXO11Q86XK2 927 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 CRAMP1Q96RY5 1269 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 PTPN18Q99952 460 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 BCO2Q9BYV7 579 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 ARHGAP39Q9C0H5 1083 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 ELP3Q9H9T3 547 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 DUOX1Q9NRD9 1551 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 ZMYND8Q9ULU4 1186 aaPredicted RBP10.03□□□□□ -0.8
LMO3-216ENST00000537568 NIP7Q9Y221 180 aaKnown RBP eCLIP10.03□□□□□ -0.8
LMO3-216ENST00000537568 ATP6V0A2Q9Y487 856 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 ZSWIM8A7E2V4 1837 aa10.03□□□□□ -0.8
LMO3-216ENST00000537568 TLDC2A0PJX2 215 aa10.02□□□□□ -0.81
LMO3-216ENST00000537568 DYRK3O43781 588 aa10.02□□□□□ -0.81
LMO3-216ENST00000537568 GHRHP01286 108 aa10.02□□□□□ -0.81
LMO3-216ENST00000537568 ZNF496Q96IT1 587 aaPredicted RBP10.02□□□□□ -0.81
LMO3-216ENST00000537568 P2RX7Q99572 595 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms