RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TAOK1Q7L7X3 1001 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 RAB3IL1Q8TBN0 382 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 RAB3IPQ96QF0 476 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 VAT1LQ9HCJ6 419 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 FAM207AQ9NSI2 230 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 GRM8O00222 908 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 ATP5DP30049 168 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 IFIT5Q13325 482 aaKnown RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 NT5DC1Q5TFE4 455 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 RNF217Q8TC41 542 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 GOLPH3LQ9H4A5 285 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 SLC4A4Q9Y6R1 1079 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 TSPOAP1O95153 1857 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 RGS16O15492 202 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 POTEJP0CG39 1038 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 NR1D1P20393 614 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 IFNAR2P48551 515 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 PPP2R5BQ15173 497 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CYB5D1Q6P9G0 228 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 TRAPPC11Q7Z392 1133 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 SPDL1Q96EA4 605 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 ADCY9O60503 1353 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 TMEM232C9JQI7 657 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 PDE4DQ08499 809 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CUL1Q13616 776 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 SLC9C2Q5TAH2 1124 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 KSR2Q6VAB6 950 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 TMEM139Q8IV31 216 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CCDC13Q8IYE1 715 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 EDC3Q96F86 508 aaKnown RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 BICD1Q96G01 975 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 KRT12Q99456 494 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 PLCB1Q9NQ66 1216 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 A0A1W2PQC6 194 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 OPHN1O60890 802 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 MYL1P05976 194 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 ZNF18P17022 549 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 MORC3Q14149 939 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 MAP7Q14244 749 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 LACTB2Q53H82 288 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 LMBR1LQ6UX01 489 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 HEATR3Q7Z4Q2 680 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 NBPF15Q8N660 670 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 ANKRD13CQ8N6S4 541 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 TBC1D5Q92609 795 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CD163L1Q9NR16 1453 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 KLHL14Q9P2G3 628 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CDK17Q00537 523 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CMPK2Q5EBM0 449 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 SEL1L2Q5TEA6 688 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 KCNV1Q6PIU1 500 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 OR8K1Q8NGG5 319 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 AENQ8WTP8 325 aaKnown RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CUL5Q93034 780 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 GFM2Q969S9 779 aaKnown RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 SPATA31D1Q6ZQQ2 1576 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 PDLIM1O00151 329 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 SRGAP2O75044 1071 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 STX2P32856 288 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 ADD1P35611 737 aaKnown RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 FNTAP49354 379 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 RPS6KA1Q15418 735 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 CCDC152Q4G0S7 254 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 ZNF572Q7Z3I7 529 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-213ENST00000537002 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 KCNV2Q8TDN2 545 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 PNKPQ96T60 521 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 USP44Q9H0E7 712 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 MKNK2Q9HBH9 465 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 USP21Q9UK80 565 aa5.93□□□□□ -1.46
PTPRD-213ENST00000537002 B4E1Z4 1266 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 NOL3O60936 208 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 LSP1P33241 339 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SLC7A5Q01650 507 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 PIK3AP1Q6ZUJ8 805 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 FUKQ8N0W3 1084 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 VPS52Q8N1B4 723 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 RGL1Q9NZL6 768 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CARMIL3Q8ND23 1372 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ATP5HO75947 161 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SYF2O95926 243 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SCP2P22307 547 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 YY1P25490 414 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 TOB2Q14106 344 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ASIC2Q16515 512 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 NAA35Q5VZE5 725 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 RRAGAQ7L523 313 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 GRAMD1CQ8IYS0 662 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 DBNDD2Q9BQY9 259 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 MTA3Q9BTC8 594 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SH3TC1Q8TE82 1336 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 GRID2IPA4D2P6 1211 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 MYO1FO00160 1098 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ACTN4O43707 911 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 N4BP1O75113 896 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 MYO1EQ12965 1108 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 IFIT1BQ5T764 474 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms