RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ABHD16BQ9H3Z7 469 aa20.89■□□□□ 0.94
TNFRSF1A-209ENST00000536717 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.94
TNFRSF1A-209ENST00000536717 WDR19Q8NEZ3 1342 aa20.89■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ACVR2BQ13705 512 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ASPRV1Q53RT3 343 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 NCOA7Q8NI08 942 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PURBQ96QR8 312 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PRO3102Q9H379 93 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 XPNPEP3Q9NQH7 507 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 LAMA3Q16787 3333 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 KBTBD13C9JR72 458 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ADCY6O43306 1168 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PGK1P00558 417 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 CLEC4DQ8WXI8 215 aa20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ZMYND8Q9ULU4 1186 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ADAMTS4O75173 837 aa20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 MYCNP04198 464 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PARP1P09874 1014 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 BAATQ14032 418 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 KIAA1211Q6ZU35 1233 aa20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 RALYLQ86SE5 291 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ADGRF4Q8IZF3 695 aa20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 SENP2Q9HC62 589 aa20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PNMA2Q9UL42 364 aa20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 FAM184BQ9ULE4 1060 aa20.87■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ATN1P54259 1190 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ANTXR2P58335 489 aa20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 CDC37Q16543 378 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 CCDC144BQ3MJ40 725 aa20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 MB21D2Q8IYB1 491 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 STAG2Q8N3U4 1231 aa20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 RBM27Q9P2N5 1060 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 SZT2Q5T011 3432 aa20.86■□□□□ 0.93
TNFRSF1A-209ENST00000536717 SYNRGQ9UMZ2 1314 aa20.85■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ASB14A6NK59 587 aa20.85■□□□□ 0.93
TNFRSF1A-209ENST00000536717 SYN1P17600 705 aa20.85■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PTPDC1A2A3K4 754 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 IFIT3O14879 490 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 DUSP11O75319 330 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ADCYAP1R1P41586 468 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 USH1GQ495M9 461 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 RNF180Q86T96 592 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 JMJD4Q9H9V9 463 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PCDH10Q9P2E7 1040 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 MAD2L2Q9UI95 211 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 PHF24Q9UPV7 400 aa20.84■□□□□ 0.93
TNFRSF1A-209ENST00000536717 LTBP2Q14767 1821 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 NECTIN1Q15223 517 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 SLC30A10Q6XR72 485 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 SLC39A5Q6ZMH5 540 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 MORC4Q8TE76 937 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 FERMT2Q96AC1 680 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ANO2Q9NQ90 1003 aa20.83■□□□□ 0.93
TNFRSF1A-209ENST00000536717 ERICH2A1L162 156 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 PALM3A6NDB9 673 aaPredicted RBP20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SLC27A2O14975 620 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 ALDH5A1P51649 535 aaPredicted RBP20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 RTP1P59025 263 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 RPS6P62753 249 aaKnown RBP20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 IRX5P78411 483 aaPredicted RBP20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 COL9A3Q14050 684 aaPredicted RBP20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 WTAPQ15007 396 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SNX17Q15036 470 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 QRICH1Q2TAL8 776 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 RNF207Q6ZRF8 634 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 KLHDC9Q8NEP7 349 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 IGDCC4Q8TDY8 1250 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 GDF15Q99988 308 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 VAT1LQ9HCJ6 419 aa20.83■□□□□ 0.92
TNFRSF1A-209ENST00000536717 KIAA1217Q5T5P2 1943 aa20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MYADML2A6NDP7 307 aa20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 KLRF2D3W0D1 207 aa20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SLC34A2O95436 690 aa20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CALML3P27482 149 aa20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SART3Q15020 963 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CCSAPQ6IQ19 270 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 ADD3Q9UEY8 706 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-209ENST00000536717 DHX16O60231 1041 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TROAPQ12815 778 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 GRM4Q14833 912 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SLC35G1Q2M3R5 365 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TMEM67Q5HYA8 995 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CREB3L3Q68CJ9 461 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 EEPD1Q7L9B9 569 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 FBXO16Q8IX29 292 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MTMR8Q96EF0 704 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TSEN34Q9BSV6 310 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 UPF3AQ9H1J1 476 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 PDGFCQ9NRA1 345 aa20.81■□□□□ 0.92
TNFRSF1A-209ENST00000536717 A0A1W2PQ45 241 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 A0A1W2PQY0 241 aa20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CST5P28325 142 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 FXR1P51114 621 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 GJA9P57773 515 aa20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 C1orf53Q5VUE5 145 aa20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TAPT1Q6NXT6 567 aa20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 RGS22Q8NE09 1264 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms