RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 QRICH1Q2TAL8 776 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 TRPM4Q8TD43 1214 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 CCDC43Q96MW1 224 aaKnown RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 DEF6Q9H4E7 631 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 DNAJC18Q9H819 358 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 POTEMA6NI47 508 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 PRPF3O43395 683 aaKnown RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 BMP3P12645 472 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 GNA11P29992 359 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 LRMPQ12912 555 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 SLC39A14Q15043 492 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 ENOX2Q16206 610 aaKnown RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 HSP90B2PQ58FF3 399 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 RETREG2Q8NC44 543 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 CBX8Q9HC52 389 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 TCP11L1Q9NUJ3 509 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 RCOR1Q9UKL0 485 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 CNTNAP5Q8WYK1 1306 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 PDE4DIPQ5VU43 2346 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 RBAK-RBAKDNI3L0D1 243 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 URI1O94763 535 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 TOB1P50616 345 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 SETQ01105 290 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 MTMR2Q13614 643 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 NONOQ15233 471 aaKnown RBP eCLIP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 SHC4Q6S5L8 630 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 DHX36Q9H2U1 1008 aaKnown RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 RAVER2Q9HCJ3 691 aaKnown RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 PAXBP1Q9Y5B6 917 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 A0A1W2PRG0 241 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 RRP1BQ14684 758 aaKnown RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 PFKFB3Q16875 520 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 GADL1Q6ZQY3 521 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 CUL5Q93034 780 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 SYT17Q9BSW7 474 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 ANAPC4Q9UJX5 808 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 PCDHA5Q9Y5H7 936 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 ZNF541Q9H0D2 1346 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 ADM5C9JUS6 153 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 GOLGA8FQ08AF8 430 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 GOLGA8DPQ0D2H9 430 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 ELF2Q15723 593 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 CCDC12Q8WUD4 166 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-207ENST00000536513 HPS3Q969F9 1004 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 SMARCE1Q969G3 411 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 PDLIM2Q96JY6 352 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 CLSTN2Q9H4D0 955 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
ABCA4-207ENST00000536513 KLRG2A4D1S0 409 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 SMTNL1A8MU46 457 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 NCAPH2Q6IBW4 605 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 KRT26Q7Z3Y9 468 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 ZNF397Q8NF99 534 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 PURBQ96QR8 312 aaKnown RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 TMEM60Q9H2L4 133 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 RNF216Q9NWF9 866 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 RSPH14Q9UHP6 348 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 PRR29P0C7W0 189 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 FOXP4Q8IVH2 680 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 AKAP11Q9UKA4 1901 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 SKILP12757 684 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 STAT3P40763 770 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 MRPL12P52815 198 aaKnown RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 ASIC1P78348 528 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 GRM4Q14833 912 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 MAP1SQ66K74 1059 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 POTEDQ86YR6 584 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 ALDH8A1Q9H2A2 487 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 JMJD4Q9H9V9 463 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
ABCA4-207ENST00000536513 PCDHA4Q9UN74 947 aa9.25□□□□□ -0.93
ABCA4-207ENST00000536513 CEP350Q5VT06 3117 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 TNRC6CQ9HCJ0 1690 aaKnown RBP9.24□□□□□ -0.93
ABCA4-207ENST00000536513 NEMFO60524 1076 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 TMEM179Q6ZVK1 233 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 ANO10Q9NW15 660 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 NRBP1Q9UHY1 535 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 CCPG1Q9ULG6 757 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 GAKO14976 1311 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-207ENST00000536513 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
ABCA4-207ENST00000536513 STAT2P52630 851 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 TGFB2P61812 414 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 ZNF543Q08ER8 600 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 TNFAIP1Q13829 316 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms