RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 USP17L1Q7RTZ2 530 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 MTA3Q9BTC8 594 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 ZEB2O60315 1214 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 RPSAP08865 295 aaKnown RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 AARSP49588 968 aaKnown RBP eCLIP15.61■□□□□ 0.092e-6■■■■□ 24
LIG1-203ENST00000536218 PLCD1P51178 756 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 CCNHP51946 323 aaPredicted RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 PNOCQ13519 176 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 E2F5Q15329 346 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 PKN1Q16512 942 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 PREPLQ4J6C6 727 aaPredicted RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 MFSD14BQ5SR56 506 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 SRBD1Q8N5C6 995 aaKnown RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 SCLT1Q96NL6 688 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 RNF26Q9BY78 433 aaPredicted RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 KLC4Q9NSK0 619 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 XBP1P17861 261 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 PEX19P40855 299 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 PPFIA1Q13136 1202 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 EARS2Q5JPH6 523 aaKnown RBP15.6■□□□□ 0.09
LIG1-203ENST00000536218 STX8Q9UNK0 236 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 EIF3HO15372 352 aaKnown RBP eCLIP15.6■□□□□ 0.09
LIG1-203ENST00000536218 PPP6R2O75170 966 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 BTDP43251 543 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 LONRF3Q496Y0 759 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 KRI1Q8N9T8 703 aaKnown RBP15.6■□□□□ 0.09
LIG1-203ENST00000536218 NAPGQ99747 312 aaPredicted RBP15.6■□□□□ 0.09
LIG1-203ENST00000536218 ADGRG1Q9Y653 693 aa15.6■□□□□ 0.09
LIG1-203ENST00000536218 MYH15Q9Y2K3 1946 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 SHOX2O60902 331 aaPredicted RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 GCKP35557 465 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 C12orf60Q5U649 245 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 MSL1Q68DK7 614 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 RAD9BQ6WBX8 426 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 FOXP1Q9H334 677 aaPredicted RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 KCNH3Q9ULD8 1083 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 PDS5AQ29RF7 1337 aaKnown RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 A0A1B0GUA9 196 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 GOLGA6BA6NDN3 693 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 ORC4O43929 436 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 FGRP09769 529 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 FNTAP49354 379 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 GTF2IP78347 998 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 IRX1P78414 480 aaPredicted RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 CRY2Q49AN0 593 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 SLC27A3Q5K4L6 730 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 ZNF444Q8N0Y2 327 aaPredicted RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 COG1Q8WTW3 980 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 VIPAS39Q9H9C1 493 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 MPHOSPH10O00566 681 aaKnown RBP15.59■□□□□ 0.09
LIG1-203ENST00000536218 FOXN1O15353 648 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 ABL1P00519 1130 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 ERCC3P19447 782 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 GSTO1P78417 241 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 FUT2Q10981 343 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 PDCLQ13371 301 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 RILPL1Q5EBL4 403 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 AMOTL1Q8IY63 956 aa15.59■□□□□ 0.09
LIG1-203ENST00000536218 TUBBP07437 444 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 LDHCP07864 332 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TSPY3P0CV98 308 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TSPY8P0CW00 308 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TUBB4BP68371 445 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TMTC3Q6ZXV5 915 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 B4GALNT4Q76KP1 1039 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 PRPF3O43395 683 aaKnown RBP15.58■□□□□ 0.08
LIG1-203ENST00000536218 BBOX1O75936 387 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 APBA3O96018 575 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 WHAMMP3Q1A5X7 153 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 SBK1Q52WX2 424 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 USP49Q70CQ1 688 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TRMT44Q8IYL2 757 aaKnown RBP15.58■□□□□ 0.08
LIG1-203ENST00000536218 IL17RBQ9NRM6 502 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TIAM2Q8IVF5 1701 aa15.58■□□□□ 0.08
LIG1-203ENST00000536218 TAF1LQ8IZX4 1826 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 MEFVO15553 781 aaPredicted RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 CALM1P0DP23 149 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 CALM2P0DP24 149 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 CALM3P0DP25 149 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PCP11498 1178 aaKnown RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 GBP2P32456 591 aaPredicted RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 KRT2P35908 639 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 TBC1D8BQ0IIM8 1120 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 TBX2Q13207 712 aaPredicted RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 CRYMQ14894 314 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 ZNF174Q15697 407 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 RESP18Q5W5W9 173 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 RCSD1Q6JBY9 416 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 STAG2Q8N3U4 1231 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 ACRBPQ8NEB7 543 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 CAPZA3Q96KX2 299 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 AKR1B15C9JRZ8 316 aaPredicted RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 POLR2DO15514 142 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms