RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
MSRB3-206ENST00000535664 SLC38A10Q9HBR0 1119 aa16.84■□□□□ 0.29
MSRB3-206ENST00000535664 FBXO28Q9NVF7 368 aa16.84■□□□□ 0.29
MSRB3-206ENST00000535664 DIS3Q9Y2L1 958 aaKnown RBP16.84■□□□□ 0.29
MSRB3-206ENST00000535664 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 PEX10O60683 326 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 MYCP01106 439 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 PDHBP11177 359 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 FDPSP14324 419 aaKnown RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 IFNAR1P17181 557 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 IKQ13123 557 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 MAP3K21Q5TCX8 1036 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 OLFML2BQ68BL8 750 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 TMTC3Q6ZXV5 915 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 ANKLE1Q8NAG6 615 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 U2AF1L4Q8WU68 220 aaKnown RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 TRIB2Q92519 343 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 KIFC2Q96AC6 838 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 NUP88Q99567 741 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 MAD2L2Q9UI95 211 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
MSRB3-206ENST00000535664 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
MSRB3-206ENST00000535664 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
MSRB3-206ENST00000535664 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 MSCO60682 206 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 TFRCP02786 760 aaKnown RBP16.82■□□□□ 0.28
MSRB3-206ENST00000535664 GJB2P29033 226 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 ADORA2AP29274 412 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 TKFCQ3LXA3 575 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 REPS2Q8NFH8 660 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 MMP19Q99542 508 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.28
MSRB3-206ENST00000535664 A0A0G2JMZ2 1700 aa16.82■□□□□ 0.28
MSRB3-206ENST00000535664 STK36Q9NRP7 1315 aa16.81■□□□□ 0.28
MSRB3-206ENST00000535664 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
MSRB3-206ENST00000535664 PRKAR2AP13861 404 aaKnown RBP16.81■□□□□ 0.28
MSRB3-206ENST00000535664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.81■□□□□ 0.28
MSRB3-206ENST00000535664 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
MSRB3-206ENST00000535664 MSL3Q8N5Y2 521 aaKnown RBP16.81■□□□□ 0.28
MSRB3-206ENST00000535664 CTCFLQ8NI51 663 aaPredicted RBP16.81■□□□□ 0.28
MSRB3-206ENST00000535664 DEFB118Q96PH6 123 aa16.81■□□□□ 0.28
MSRB3-206ENST00000535664 CRISPLD2Q9H0B8 497 aa16.81■□□□□ 0.28
MSRB3-206ENST00000535664 NRBP1Q9UHY1 535 aa16.81■□□□□ 0.28
MSRB3-206ENST00000535664 RLFQ13129 1914 aa16.8■□□□□ 0.28
MSRB3-206ENST00000535664 CPLX1O14810 134 aa16.8■□□□□ 0.28
MSRB3-206ENST00000535664 CDKL5O76039 1030 aa16.8■□□□□ 0.28
MSRB3-206ENST00000535664 KIF5BP33176 963 aa16.8■□□□□ 0.28
MSRB3-206ENST00000535664 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
MSRB3-206ENST00000535664 GPATCH4Q5T3I0 446 aaKnown RBP16.8■□□□□ 0.28
MSRB3-206ENST00000535664 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
MSRB3-206ENST00000535664 BTNL9Q6UXG8 535 aa16.8■□□□□ 0.28
MSRB3-206ENST00000535664 CMTR1Q8N1G2 835 aaKnown RBP16.8■□□□□ 0.28
MSRB3-206ENST00000535664 SRBD1Q8N5C6 995 aaKnown RBP16.8■□□□□ 0.28
MSRB3-206ENST00000535664 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
MSRB3-206ENST00000535664 PARP1P09874 1014 aaKnown RBP16.79■□□□□ 0.28
MSRB3-206ENST00000535664 GOLGA8HP0CJ92 632 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
MSRB3-206ENST00000535664 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
MSRB3-206ENST00000535664 CPXCR1Q8N123 301 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 PHKBQ93100 1093 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 HTATIP2Q9BUP3 242 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 ZNF236Q9UL36 1845 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
MSRB3-206ENST00000535664 CYTH3O43739 400 aa16.78■□□□□ 0.28
MSRB3-206ENST00000535664 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
MSRB3-206ENST00000535664 GNAQP50148 359 aa16.78■□□□□ 0.28
MSRB3-206ENST00000535664 PKP1Q13835 747 aa16.78■□□□□ 0.28
MSRB3-206ENST00000535664 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
MSRB3-206ENST00000535664 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
MSRB3-206ENST00000535664 PLXNB2O15031 1838 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.28
MSRB3-206ENST00000535664 KLRF2D3W0D1 207 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.28
MSRB3-206ENST00000535664 IGHA2P01877 340 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 SMARCA1P28370 1054 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 CCL14Q16627 93 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 KCTD1Q719H9 257 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
MSRB3-206ENST00000535664 NPLOC4Q8TAT6 608 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 LZTS2Q9BRK4 669 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 SPZ1Q9BXG8 430 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 SLC26A6Q9BXS9 759 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 MAF1Q9H063 256 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 ACAD9Q9H845 621 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
MSRB3-206ENST00000535664 CHMP5Q9NZZ3 219 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 ORC3Q9UBD5 711 aaPredicted RBP16.77■□□□□ 0.28
MSRB3-206ENST00000535664 PRR12Q9ULL5 1215 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms