RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 NDUFB10O96000 172 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 UBASH3AP57075 661 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 HSP90AA2PQ14568 343 aaPredicted RBP20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 NIM1KQ8IY84 436 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 CCDC17Q96LX7 622 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 GDAQ9Y2T3 454 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 VIL1P09327 827 aaKnown RBP20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 UBA7P41226 1012 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 NT5DC1Q5TFE4 455 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 GMLQ99445 158 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
HTATSF1-204ENST00000535601 POTEMA6NI47 508 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 ZBTB5O15062 677 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 OR52Z1P0C646 297 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 CDC37Q16543 378 aaPredicted RBP20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 LRRC8AQ8IWT6 810 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 USP27XA6NNY8 438 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 SPATA20Q8TB22 786 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 PSMD1Q99460 953 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 DISC1Q9NRI5 854 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 INTS13Q9NVM9 706 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 PIM2Q9P1W9 311 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 IKBKBO14920 756 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 GALNT17Q6IS24 598 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 CTNND2Q9UQB3 1225 aa20.67■□□□□ 0.9
HTATSF1-204ENST00000535601 CDK11BP21127 795 aaKnown RBP20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 LONP1P36776 959 aaKnown RBP20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 TPM4P67936 248 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 RASSF7Q02833 373 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 DGKZQ13574 1117 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 ARL6IP4Q66PJ3 421 aaKnown RBP20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 KANK3Q6NY19 840 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 P2RX7Q99572 595 aaKnown RBP20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 CNTNAP1P78357 1384 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 PLCG1P19174 1290 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 RRAGBQ5VZM2 374 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 TRMT1Q9NXH9 659 aaKnown RBP20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 ZNRF3Q9ULT6 936 aa20.66■□□□□ 0.9
HTATSF1-204ENST00000535601 CDC25BP30305 580 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 GPATCH4Q5T3I0 446 aaKnown RBP20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 HPS3Q969F9 1004 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 PSTPIP2Q9H939 334 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 MYO3BQ8WXR4 1341 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 ARMCX5Q6P1M9 558 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 ZFP91Q96JP5 570 aaPredicted RBP20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 C16orf45Q96MC5 204 aaPredicted RBP20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 NUDT12Q9BQG2 462 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 FZD1Q9UP38 647 aa20.65■□□□□ 0.9
HTATSF1-204ENST00000535601 HOXA13P31271 388 aaPredicted RBP20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 TXLNAP40222 546 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 CABP7Q86V35 215 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 NYAP2Q9P242 653 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 ENTPD3O75355 529 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 SKILP12757 684 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 DALRD3Q5D0E6 543 aaKnown RBP20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 SLC30A10Q6XR72 485 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 MLKLQ8NB16 471 aa20.64■□□□□ 0.89
HTATSF1-204ENST00000535601 PPP1R3GB7ZBB8 358 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 WNT10BO00744 389 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 SMARCA1P28370 1054 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 CALCRLQ16602 461 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 TRIM49BA6NDI0 452 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 NFKBIEO00221 500 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 SAMD7Q7Z3H4 446 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 MMTAG2Q9BU76 263 aaKnown RBP20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 RIC8AQ9NPQ8 531 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 GJA3Q9Y6H8 435 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 PSME4Q14997 1843 aa20.63■□□□□ 0.89
HTATSF1-204ENST00000535601 FBXO41Q8TF61 875 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 CUL5Q93034 780 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 SYNRGQ9UMZ2 1314 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 CCZ1BP86790 482 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 CCZ1P86791 482 aaPredicted RBP20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 SPDYE2Q495Y8 402 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 FAM83BQ5T0W9 1011 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 PRAMEF18Q5VWM3 479 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 TSC1Q92574 1164 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 MKL1Q969V6 931 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 TAOK3Q9H2K8 898 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 ATRNL1Q5VV63 1379 aa20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 RPN1P04843 607 aaKnown RBP20.62■□□□□ 0.89
HTATSF1-204ENST00000535601 PRELPP51888 382 aa20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 CCDC174Q6PII3 467 aa20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 ESYT2A0FGR8 921 aa20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 TEX33O43247 280 aa20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 ELOA2Q8IYF1 753 aaPredicted RBP20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 TBC1D5Q92609 795 aa20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 FBXO28Q9NVF7 368 aa20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 MORC2Q9Y6X9 1032 aaPredicted RBP20.61■□□□□ 0.89
HTATSF1-204ENST00000535601 GTPBP6O43824 516 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms