RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 TMCO2Q7Z6W1 182 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-204ENST00000535180 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
VAMP1-204ENST00000535180 RAD9AQ99638 391 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 AP5M1Q9H0R1 490 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 BAHCC1Q9P281 2608 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 WDR87Q6ZQQ6 2873 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 CYP7A1P22680 504 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
VAMP1-204ENST00000535180 SNRNP48Q6IEG0 339 aaKnown RBP13.02□□□□□ -0.33
VAMP1-204ENST00000535180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.02□□□□□ -0.33
VAMP1-204ENST00000535180 MIGA1Q8NAN2 632 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 RIPK3Q9Y572 518 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 VPS13AQ96RL7 3174 aa13.02□□□□□ -0.33
VAMP1-204ENST00000535180 ZNF292O60281 2723 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 PRR23AA6NEV1 266 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-204ENST00000535180 RGS20O76081 388 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 GJB5O95377 273 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-204ENST00000535180 PTPROQ16827 1216 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 TIGD5Q53EQ6 642 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 EP400NLQ6ZTU2 488 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.01□□□□□ -0.33
VAMP1-204ENST00000535180 Q9Y3F1 56 aa13.01□□□□□ -0.33
VAMP1-204ENST00000535180 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 LTBRP36941 435 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 DEFB103AP81534 67 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 ICA1Q05084 483 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 ANKRD35Q8N283 1001 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 FSD1Q9BTV5 496 aa13□□□□□ -0.33
VAMP1-204ENST00000535180 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
VAMP1-204ENST00000535180 H0Y858 1186 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 SMPD1P17405 629 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 AVPR2P30518 371 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 VCPP55072 806 aaKnown RBP12.99□□□□□ -0.33
VAMP1-204ENST00000535180 ZXDAP98168 799 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 BFSP2Q13515 415 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 TCEAL5Q5H9L2 206 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 PIH1D3Q9NQM4 214 aaKnown RBP12.99□□□□□ -0.33
VAMP1-204ENST00000535180 TLR9Q9NR96 1032 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 CLDND1Q9NY35 253 aa12.99□□□□□ -0.33
VAMP1-204ENST00000535180 BAZ2AQ9UIF9 1905 aaKnown RBP12.99□□□□□ -0.33
VAMP1-204ENST00000535180 MED19A0JLT2 244 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-204ENST00000535180 ATP2A1O14983 1001 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 MBTPS2O43462 519 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 NCK2O43639 380 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 PTGS1P23219 599 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 NUBP1P53384 320 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 EVX2Q03828 476 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
VAMP1-204ENST00000535180 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 DMXL1Q9Y485 3027 aa12.98□□□□□ -0.33
VAMP1-204ENST00000535180 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 DNAH14Q0VDD8 3507 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 STXBP3O00186 592 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 AKR1B1P15121 316 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 NBL1P41271 181 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 FAM83BQ5T0W9 1011 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 CRBNQ96SW2 442 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 NSUN3Q9H649 340 aaKnown RBP12.97□□□□□ -0.33
VAMP1-204ENST00000535180 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 POLR3EQ9NVU0 708 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
VAMP1-204ENST00000535180 MYH4Q9Y623 1939 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 ACACBO00763 2458 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 ABHD14A-ACY1A0A1B0GW23 586 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 ASB14A6NK59 587 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
VAMP1-204ENST00000535180 ZAP70P43403 619 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 SLC4A3P48751 1232 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.33
VAMP1-204ENST00000535180 CNTN2Q02246 1040 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 SIGLEC14Q08ET2 396 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 GPNMBQ14956 572 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 CTC1Q2NKJ3 1217 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 CPXCR1Q8N123 301 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 FAM133AQ8N9E0 248 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 CHST13Q8NET6 341 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-204ENST00000535180 PDGFCQ9NRA1 345 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
VAMP1-204ENST00000535180 INSL6Q9Y581 213 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms