RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 TSEN34Q9BSV6 310 aaKnown RBP12.54□□□□□ -0.4
TNC-209ENST00000534839 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
TNC-209ENST00000534839 RFX7Q2KHR2 1363 aa12.54□□□□□ -0.4
TNC-209ENST00000534839 TTC24A2A3L6 582 aaPredicted RBP12.53□□□□□ -0.4
TNC-209ENST00000534839 SMPD1P17405 629 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 ADORA2AP29274 412 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 AVPR2P30518 371 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 CAP2P40123 477 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 CCL23P55773 120 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 FOXO4P98177 505 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 FAM126BQ8IXS8 530 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
TNC-209ENST00000534839 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 C1QTNF2Q9BXJ5 285 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
TNC-209ENST00000534839 LCE2BO14633 110 aa12.52□□□□□ -0.41
TNC-209ENST00000534839 COBLO75128 1261 aa12.52□□□□□ -0.41
TNC-209ENST00000534839 BTBD7Q9P203 1132 aa12.52□□□□□ -0.41
TNC-209ENST00000534839 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 CD4P01730 458 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 PICALMQ13492 652 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 LAPTM4AQ15012 233 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 KCNA10Q16322 511 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 CAVIN4Q5BKX8 364 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 TAF7LQ5H9L4 462 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 CCSAPQ6IQ19 270 aaPredicted RBP12.51□□□□□ -0.41
TNC-209ENST00000534839 NKD2Q969F2 451 aaPredicted RBP12.51□□□□□ -0.41
TNC-209ENST00000534839 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 ZNF236Q9UL36 1845 aa12.51□□□□□ -0.41
TNC-209ENST00000534839 FAM187AA6NFU0 413 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 C19orf81C9J6K1 198 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 ARVCFO00192 962 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 TLR3O15455 904 aaKnown RBP12.5□□□□□ -0.41
TNC-209ENST00000534839 PRDX5P30044 214 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 KLHDC9Q8NEP7 349 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 FAM174AQ8TBP5 190 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 GLT1D1Q96MS3 346 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 PUS3Q9BZE2 481 aaKnown RBP12.5□□□□□ -0.41
TNC-209ENST00000534839 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 HIPK3Q9H422 1215 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 GDPD2Q9HCC8 539 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 ELP1O95163 1332 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 FAM186AA6NE01 2351 aa12.5□□□□□ -0.41
TNC-209ENST00000534839 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
TNC-209ENST00000534839 TAL1P17542 331 aaPredicted RBP12.49□□□□□ -0.41
TNC-209ENST00000534839 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
TNC-209ENST00000534839 JAG1P78504 1218 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 LMOD3Q0VAK6 560 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 PUM1Q14671 1186 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNC-209ENST00000534839 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNC-209ENST00000534839 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 FRMD5Q7Z6J6 570 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
TNC-209ENST00000534839 POM121Q96HA1 1249 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 MAML3Q96JK9 1138 aa12.49□□□□□ -0.41
TNC-209ENST00000534839 RIF1Q5UIP0 2472 aaKnown RBP12.49□□□□□ -0.41
TNC-209ENST00000534839 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 USP17L10C9JJH3 530 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 ZXDAP98168 799 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 PTK2Q05397 1052 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 ADAM32Q8TC27 787 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 SCLYQ96I15 445 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 PNNQ9H307 717 aaKnown RBP12.48□□□□□ -0.41
TNC-209ENST00000534839 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 VPS13AQ96RL7 3174 aa12.48□□□□□ -0.41
TNC-209ENST00000534839 TPRP12270 2363 aaKnown RBP12.47□□□□□ -0.41
TNC-209ENST00000534839 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
TNC-209ENST00000534839 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 Q6ZNB5 142 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 SLC9A7Q96T83 725 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 NRBP1Q9UHY1 535 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
TNC-209ENST00000534839 ROBO3Q96MS0 1386 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 ACACBO00763 2458 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 STRNO43815 780 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 ZNF865P0CJ78 1059 aaPredicted RBP12.46□□□□□ -0.41
TNC-209ENST00000534839 AKR1A1P14550 325 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 ARID5BQ14865 1188 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 SHROOM1Q2M3G4 852 aaPredicted RBP12.46□□□□□ -0.41
TNC-209ENST00000534839 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
TNC-209ENST00000534839 PHOSPHO2Q8TCD6 241 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 HPS1Q92902 700 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 CDK15Q96Q40 435 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
TNC-209ENST00000534839 MRS2Q9HD23 443 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 COG6Q9Y2V7 657 aa12.46□□□□□ -0.41
TNC-209ENST00000534839 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms