RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MSANTD4Q8NCY6 345 aa19.02■□□□□ 0.64
PHRF1-206ENST00000534320 ARHGEF28Q8N1W1 1705 aaKnown RBP19.02■□□□□ 0.64
PHRF1-206ENST00000534320 FLOT1O75955 427 aa19.02■□□□□ 0.64
PHRF1-206ENST00000534320 LACTBP83111 547 aaPredicted RBP19.02■□□□□ 0.64
PHRF1-206ENST00000534320 SEL1L2Q5TEA6 688 aa19.02■□□□□ 0.64
PHRF1-206ENST00000534320 C8orf74Q6P047 294 aa19.02■□□□□ 0.64
PHRF1-206ENST00000534320 NOL3O60936 208 aaKnown RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 XRCC5P13010 732 aaKnown RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 COPB1P53618 953 aaKnown RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 SH3RF3Q8TEJ3 882 aaPredicted RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 SMC6Q96SB8 1091 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 LSM14BQ9BX40 385 aaKnown RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 DHX36Q9H2U1 1008 aaKnown RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 AS3MTQ9HBK9 375 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 FEZ2Q9UHY8 353 aaPredicted RBP19.02■□□□□ 0.63
PHRF1-206ENST00000534320 STK36Q9NRP7 1315 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 SLC16A2P36021 539 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 PLCB3Q01970 1234 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 CC2D2BQ6DHV5 1058 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 LY9Q9HBG7 655 aa19.02■□□□□ 0.63
PHRF1-206ENST00000534320 A0A1W2PRG0 241 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 CLRN2A0PK11 232 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 CYP2D6P10635 497 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 CPLX4Q7Z7G2 160 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 PLA2G4DQ86XP0 818 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 LMNTD2Q8IXW0 634 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 CCDC77Q9BR77 488 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 FAM184BQ9ULE4 1060 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 SPOPO43791 374 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 ETF1P62495 437 aaKnown RBP19.01■□□□□ 0.63
PHRF1-206ENST00000534320 CCDC26Q8TAB7 109 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 ARHGEF1Q92888 912 aaKnown RBP19.01■□□□□ 0.63
PHRF1-206ENST00000534320 PGBD1Q96JS3 809 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 IKBKGQ9Y6K9 419 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 UTYO14607 1347 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 NOP56O00567 594 aaKnown RBP19.01■□□□□ 0.63
PHRF1-206ENST00000534320 MXRA7P84157 204 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 SMYD4Q8IYR2 804 aaPredicted RBP19.01■□□□□ 0.63
PHRF1-206ENST00000534320 SPICE1Q8N0Z3 855 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 LARP4BQ92615 738 aaKnown RBP19.01■□□□□ 0.63
PHRF1-206ENST00000534320 FAM76AQ8TAV0 307 aa19.01■□□□□ 0.63
PHRF1-206ENST00000534320 GSG1L2A8MUP6 293 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 VGLL3A8MV65 326 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 MTA3Q9BTC8 594 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 STX10O60499 249 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 RNASE9P60153 205 aaKnown RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 DCAF15Q66K64 600 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 STOX1Q6ZVD7 989 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 COA7Q96BR5 231 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 ARMCX3Q9UH62 379 aaPredicted RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 BCRP11274 1271 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 FERP16591 822 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 CFAP58Q5T655 872 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 DDX23Q9BUQ8 820 aaKnown RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 MTRF1LQ9UGC7 380 aaKnown RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 TESPA1A2RU30 521 aaPredicted RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 PSDA5PKW4 1024 aaPredicted RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 UTP14CQ5TAP6 766 aaKnown RBP19■□□□□ 0.63
PHRF1-206ENST00000534320 ZNF609O15014 1411 aa19■□□□□ 0.63
PHRF1-206ENST00000534320 COBLO75128 1261 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 GDF11O95390 407 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 CDC25AP30304 524 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 GRIPAP1Q4V328 841 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 MCF2L2Q86YR7 1114 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-206ENST00000534320 GCFC2P16383 781 aaKnown RBP18.99■□□□□ 0.63
PHRF1-206ENST00000534320 ADRA2BP18089 450 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 MAP2K2P36507 400 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 PPP1R7Q15435 360 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 RDH13Q8NBN7 331 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-206ENST00000534320 COL4A3BPQ9Y5P4 624 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 ARHGEF16Q5VV41 709 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 CACTINQ8WUQ7 758 aaKnown RBP18.99■□□□□ 0.63
PHRF1-206ENST00000534320 EPSTI1Q96J88 318 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 PI4KBQ9UBF8 816 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 SERPINA10Q9UK55 444 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 CSF1RP07333 972 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 MMP10P09238 476 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 RXRBP28702 533 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 RCAN1P53805 252 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 DNAJC21Q5F1R6 531 aaKnown RBP18.99■□□□□ 0.63
PHRF1-206ENST00000534320 TEKT3Q9BXF9 490 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 AZI2Q9H6S1 392 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 BCL2L12Q9HB09 334 aa18.99■□□□□ 0.63
PHRF1-206ENST00000534320 A6NNZ2 444 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 ATP2A1O14983 1001 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 CYP4A11Q02928 519 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 TUBB8Q3ZCM7 444 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 ZNF658Q5TYW1 1059 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-206ENST00000534320 OTUD6AQ7L8S5 288 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-206ENST00000534320 EEF2KMTQ96G04 330 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 IWS1Q96ST2 819 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 PSMB7Q99436 277 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHRF1-206ENST00000534320 CYP2J2P51589 502 aa18.98■□□□□ 0.63
PHRF1-206ENST00000534320 DHTKD1Q96HY7 919 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms