RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 MTA3Q9BTC8 594 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 FBXO40Q9UH90 709 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
CMTM1-219ENST00000533953 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 KIAA0100Q14667 2235 aaKnown RBP15.58■□□□□ 0.08
CMTM1-219ENST00000533953 POTEB2H3BUK9 544 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 DDAH1O94760 285 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 SGPL1O95470 568 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 TFRCP02786 760 aaKnown RBP15.58■□□□□ 0.08
CMTM1-219ENST00000533953 RPS6KB1P23443 525 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 RGS19P49795 217 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 APOBRQ0VD83 1088 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 OLFML2BQ68BL8 750 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 SLC30A10Q6XR72 485 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 MICU3Q86XE3 530 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 TMTC2Q8N394 836 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 SRBD1Q8N5C6 995 aaKnown RBP15.58■□□□□ 0.08
CMTM1-219ENST00000533953 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-219ENST00000533953 UPF3BQ9BZI7 483 aaKnown RBP15.58■□□□□ 0.08
CMTM1-219ENST00000533953 RIOX1Q9H6W3 641 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 PAK6Q9NQU5 681 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-219ENST00000533953 SLC5A4Q9NY91 659 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 CYP39A1Q9NYL5 469 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 ASTN1O14525 1302 aa15.58■□□□□ 0.08
CMTM1-219ENST00000533953 KLF18A0A0U1RQI7 1052 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 PTPDC1A2A3K4 754 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 SNAI1O95863 264 aaPredicted RBP15.57■□□□□ 0.08
CMTM1-219ENST00000533953 CALML3P27482 149 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 GJA8P48165 433 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 FGD1P98174 961 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 APOA5Q6Q788 366 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 FBXO11Q86XK2 927 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 FAM133AQ8N9E0 248 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 FANCBQ8NB91 859 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 BRF1Q92994 677 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 TINF2Q9BSI4 451 aa15.57■□□□□ 0.08
CMTM1-219ENST00000533953 SMCHD1A6NHR9 2005 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 CENPFP49454 3210 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 HMGB1P09429 215 aaKnown RBP15.56■□□□□ 0.08
CMTM1-219ENST00000533953 CYBAP13498 195 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 C8orf34Q49A92 452 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 LHX8Q68G74 356 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.56■□□□□ 0.08
CMTM1-219ENST00000533953 SGMS1Q86VZ5 419 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 ZSWIM6Q9HCJ5 1215 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 DIS3Q9Y2L1 958 aaKnown RBP15.56■□□□□ 0.08
CMTM1-219ENST00000533953 WDR19Q8NEZ3 1342 aa15.56■□□□□ 0.08
CMTM1-219ENST00000533953 ZBTB5O15062 677 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 ZBTB43O43298 467 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 PPFIA3O75145 1194 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 PSMA5P28066 241 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 CDC27P30260 824 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 RPS6P62753 249 aaKnown RBP15.55■□□□□ 0.08
CMTM1-219ENST00000533953 SYNE3Q6ZMZ3 975 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 RUFY3Q7L099 469 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
CMTM1-219ENST00000533953 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 FAM217BQ9NTX9 383 aaPredicted RBP15.55■□□□□ 0.08
CMTM1-219ENST00000533953 PCDHA1Q9Y5I3 950 aa15.55■□□□□ 0.08
CMTM1-219ENST00000533953 OPLAHO14841 1288 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 EPB41L2O43491 1005 aaKnown RBP15.54■□□□□ 0.08
CMTM1-219ENST00000533953 ZNF865P0CJ78 1059 aaPredicted RBP15.54■□□□□ 0.08
CMTM1-219ENST00000533953 PTGS1P23219 599 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 KIF5BP33176 963 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 RNF207Q6ZRF8 634 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 TMTC3Q6ZXV5 915 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 ARMCX2Q7L311 632 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 EEPD1Q7L9B9 569 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 DIS3LQ8TF46 1054 aaKnown RBP15.54■□□□□ 0.08
CMTM1-219ENST00000533953 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 CRISPLD2Q9H0B8 497 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.54■□□□□ 0.08
CMTM1-219ENST00000533953 COL20A1Q9P218 1284 aa15.54■□□□□ 0.08
CMTM1-219ENST00000533953 PFASO15067 1338 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 ABCB11O95342 1321 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 GOLGA8AA7E2F4 631 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 GOLGA8BA8MQT2 603 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 DTNBO60941 627 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 CALM1P0DP23 149 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 CALM2P0DP24 149 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 CALM3P0DP25 149 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 ADD1P35611 737 aaKnown RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 IRX5P78411 483 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 MLLT1Q03111 559 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 TOB2Q14106 344 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 RTN1Q16799 776 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 TMEM63BQ5T3F8 832 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 TAAR1Q96RJ0 339 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 DDX20Q9UHI6 824 aaKnown RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 ZHX1Q9UKY1 873 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-219ENST00000533953 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
CMTM1-219ENST00000533953 CFBP00751 764 aa15.52■□□□□ 0.08
CMTM1-219ENST00000533953 HOXA13P31271 388 aaPredicted RBP15.52■□□□□ 0.08
CMTM1-219ENST00000533953 MNX1P50219 401 aaPredicted RBP15.52■□□□□ 0.08
CMTM1-219ENST00000533953 CCT2P78371 535 aaKnown RBP15.52■□□□□ 0.08
CMTM1-219ENST00000533953 ZNF467Q7Z7K2 595 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms