RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 PPP1R11O60927 126 aaPredicted RBP19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 MCM2P49736 904 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 FLT3LGP49771 235 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 PRKCZQ05513 592 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 IRF5Q13568 498 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 KCTD2Q14681 263 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 CPLX2Q6PUV4 134 aaKnown RBP19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 RGS22Q8NE09 1264 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 MMP19Q99542 508 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 HOMER2Q9NSB8 354 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 RBM27Q9P2N5 1060 aaKnown RBP19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 GABRQQ9UN88 632 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 PTPN22Q9Y2R2 807 aa19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 MRPL11Q9Y3B7 192 aaKnown RBP19.04■□□□□ 0.64
PACSIN3-210ENST00000533686 CPLX1O14810 134 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 PRPF3O43395 683 aaKnown RBP19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 HOXC6P09630 235 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 ADORA2AP29274 412 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 RGS2P41220 211 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 MAP2K5Q13163 448 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 USH1GQ495M9 461 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 MUM1L1Q5H9M0 696 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 NOL8Q76FK4 1167 aaKnown RBP19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 CLEC4DQ8WXI8 215 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 GTF3C6Q969F1 213 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 RNF26Q9BY78 433 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 SH2B1Q9NRF2 756 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 PCDHA1Q9Y5I3 950 aa19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 V9GY48 417 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-210ENST00000533686 CDKL5O76039 1030 aa19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 LARGE1O95461 756 aa19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 XRCC5P13010 732 aaKnown RBP19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 ANKRD35Q8N283 1001 aa19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 PIBF1Q8WXW3 757 aa19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 SLC5A4Q9NY91 659 aa19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 MGAMO43451 1857 aa19.02■□□□□ 0.64
PACSIN3-210ENST00000533686 PFASO15067 1338 aa19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 BAZ2BQ9UIF8 2168 aaKnown RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 hCG_1984214I3L0E3 225 aa19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 AKAP17AQ02040 695 aaKnown RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 FBXO46Q6PJ61 603 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 MCF2L2Q86YR7 1114 aa19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 SAMD3Q8N6K7 520 aa19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 ZNF713Q8N859 430 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 DDX11Q96FC9 970 aa19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 A1CFQ9NQ94 594 aaKnown RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 DIS3Q9Y2L1 958 aaKnown RBP19.01■□□□□ 0.63
PACSIN3-210ENST00000533686 ZSWIM8A7E2V4 1837 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 DNAJC25-GNG10A0A024R161 153 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 hCG_1642624A0A1W2PR95 340 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 NFIBO00712 420 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 COBLO75128 1261 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 GHRHRQ02643 423 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 SSRP1Q08945 709 aaKnown RBP19■□□□□ 0.63
PACSIN3-210ENST00000533686 DPP9Q86TI2 863 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
PACSIN3-210ENST00000533686 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 NECAB1Q8N987 351 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 RAET1EQ8TD07 263 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 PXYLP1Q8TE99 480 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 PHKBQ93100 1093 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 APBA2Q99767 749 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 SLC26A6Q9BXS9 759 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 MAP3K20Q9NYL2 800 aaKnown RBP19■□□□□ 0.63
PACSIN3-210ENST00000533686 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
PACSIN3-210ENST00000533686 CYP2B6P20813 491 aa18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 PKN1Q16512 942 aa18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 PFKFB3Q16875 520 aaPredicted RBP18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 ZNF792Q3KQV3 632 aa18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 NSMFQ6X4W1 530 aa18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 PTCH2Q9Y6C5 1203 aa18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 ZNF236Q9UL36 1845 aa18.99■□□□□ 0.63
PACSIN3-210ENST00000533686 DOCK3Q8IZD9 2030 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 POTEB2H3BUK9 544 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 OPLAHO14841 1288 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 DEXIO95424 95 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 CTDNEP1O95476 244 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 SCG2P13521 617 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 WWC2Q6AWC2 1192 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 PPP1R18Q6NYC8 613 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 RNF207Q6ZRF8 634 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 HEATR3Q7Z4Q2 680 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 TEX2Q8IWB9 1127 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 FAM133AQ8N9E0 248 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 SLAIN1Q8ND83 568 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 BARHL2Q9NY43 387 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 STK36Q9NRP7 1315 aa18.98■□□□□ 0.63
PACSIN3-210ENST00000533686 ADCY3O60266 1144 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 PGK2P07205 417 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 RPS6P62753 249 aaKnown RBP18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 ST3GAL1Q11201 340 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 BAATQ14032 418 aaPredicted RBP18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 OLFML2BQ68BL8 750 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 NPLOC4Q8TAT6 608 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 LLPHQ9BRT6 129 aaKnown RBP18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 MCOLN1Q9GZU1 580 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 PLXNB2O15031 1838 aa18.97■□□□□ 0.63
PACSIN3-210ENST00000533686 SMCHD1A6NHR9 2005 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms