RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 ICAM1P05362 532 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 SNHG28P0DPA3 235 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 PDHBP11177 359 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 CCDC96Q2M329 555 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 CCDC144BQ3MJ40 725 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 CWC27Q6UX04 472 aaKnown RBP13.32□□□□□ -0.28
CLCF1-202ENST00000533438 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLCF1-202ENST00000533438 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
CLCF1-202ENST00000533438 TTC14Q96N46 770 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 UPF3AQ9H1J1 476 aaKnown RBP13.32□□□□□ -0.28
CLCF1-202ENST00000533438 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
CLCF1-202ENST00000533438 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 HIP1O00291 1037 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 SLC16A2P36021 539 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 ACLYP53396 1101 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 GJA9P57773 515 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 NKX3-2P78367 333 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
CLCF1-202ENST00000533438 TLE2Q04725 743 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 KCNA10Q16322 511 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 ESR2Q92731 530 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 DSCC1Q9BVC3 393 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
CLCF1-202ENST00000533438 DIAPH3Q9NSV4 1193 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 CCPG1Q9ULG6 757 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 PRUNE2Q8WUY3 3088 aa13.31□□□□□ -0.28
CLCF1-202ENST00000533438 FRMPD2Q68DX3 1309 aaPredicted RBP13.31□□□□□ -0.28
CLCF1-202ENST00000533438 ASB14A6NK59 587 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 ZNF213O14771 459 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 CLTBP09497 229 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 ITGB8P26012 769 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 PDE4AP27815 886 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 NT5C2P49902 561 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 ZNF543Q08ER8 600 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 ANKRD33Q7Z3H0 272 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 BADQ92934 168 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
CLCF1-202ENST00000533438 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.29□□□□□ -0.28
CLCF1-202ENST00000533438 CTAGE5O15320 804 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
CLCF1-202ENST00000533438 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 PCSK9Q8NBP7 692 aaKnown RBP13.29□□□□□ -0.28
CLCF1-202ENST00000533438 MORC4Q8TE76 937 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 ZKSCAN3Q9BRR0 538 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 IL25Q9H293 177 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 SEMA6BQ9H3T3 888 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 STARD7Q9NQZ5 370 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 GNEQ9Y223 722 aaKnown RBP13.29□□□□□ -0.28
CLCF1-202ENST00000533438 MYH6P13533 1939 aa13.29□□□□□ -0.28
CLCF1-202ENST00000533438 NFIBO00712 420 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 ASGR1P07306 291 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 GSPT1P15170 499 aaKnown RBP13.28□□□□□ -0.28
CLCF1-202ENST00000533438 SMAD3P84022 425 aaKnown RBP13.28□□□□□ -0.28
CLCF1-202ENST00000533438 FAAP100Q0VG06 881 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 TAPT1Q6NXT6 567 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 NSMFQ6X4W1 530 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 GLT1D1Q96MS3 346 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
CLCF1-202ENST00000533438 SPC25Q9HBM1 224 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
CLCF1-202ENST00000533438 ELP1O95163 1332 aa13.28□□□□□ -0.28
CLCF1-202ENST00000533438 LOC102724159A0A0B4J2E5 919 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 B4E1Z4 1266 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
CLCF1-202ENST00000533438 KDM4AO75164 1064 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 CDK7P50613 346 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 TNFAIP2Q03169 654 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 BAATQ14032 418 aaPredicted RBP13.27□□□□□ -0.29
CLCF1-202ENST00000533438 PWP2Q15269 919 aaKnown RBP13.27□□□□□ -0.29
CLCF1-202ENST00000533438 SHHQ15465 462 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.29
CLCF1-202ENST00000533438 CCDC178Q5BJE1 867 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 C9orf50Q5SZB4 431 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 GPATCH4Q5T3I0 446 aaKnown RBP13.27□□□□□ -0.29
CLCF1-202ENST00000533438 TTC22Q5TAA0 569 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 IQCA1Q86XH1 822 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 CLEC4DQ8WXI8 215 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 ANKS1AQ92625 1134 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 CDX2Q99626 313 aaPredicted RBP13.27□□□□□ -0.29
CLCF1-202ENST00000533438 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 MUC3AQ02505 3323 aa13.27□□□□□ -0.29
CLCF1-202ENST00000533438 SMPD1P17405 629 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
CLCF1-202ENST00000533438 GNASQ5JWF2 1037 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 ZNF697Q5TEC3 545 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 MROH7Q68CQ1 1323 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 EEPD1Q7L9B9 569 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 TLK2Q86UE8 772 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 FBXO16Q8IX29 292 aaPredicted RBP13.26□□□□□ -0.29
CLCF1-202ENST00000533438 PNMA1Q8ND90 353 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
CLCF1-202ENST00000533438 VTA1Q9NP79 307 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 PDGFCQ9NRA1 345 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms