RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 B4E1Z4 1266 aa27.5■■□□□ 1.99
SMPD1-209ENST00000533196 TRIM60Q495X7 471 aa27.5■■□□□ 1.99
SMPD1-209ENST00000533196 PNMA1Q8ND90 353 aa27.5■■□□□ 1.99
SMPD1-209ENST00000533196 UPF3AQ9H1J1 476 aaKnown RBP27.5■■□□□ 1.99
SMPD1-209ENST00000533196 KAT14Q9H8E8 782 aa27.5■■□□□ 1.99
SMPD1-209ENST00000533196 ZSWIM5Q9P217 1185 aa27.5■■□□□ 1.99
SMPD1-209ENST00000533196 LCTP09848 1927 aa27.49■■□□□ 1.99
SMPD1-209ENST00000533196 DNAH12Q6ZR08 3092 aa27.49■■□□□ 1.99
SMPD1-209ENST00000533196 A0A1W2PQ45 241 aaPredicted RBP27.49■■□□□ 1.99
SMPD1-209ENST00000533196 A0A1W2PQY0 241 aa27.49■■□□□ 1.99
SMPD1-209ENST00000533196 NSMFQ6X4W1 530 aa27.49■■□□□ 1.99
SMPD1-209ENST00000533196 PCSK9Q8NBP7 692 aaKnown RBP27.49■■□□□ 1.99
SMPD1-209ENST00000533196 NUP133Q8WUM0 1156 aa27.49■■□□□ 1.99
SMPD1-209ENST00000533196 LENG1Q96BZ8 264 aaPredicted RBP27.49■■□□□ 1.99
SMPD1-209ENST00000533196 IL25Q9H293 177 aa27.49■■□□□ 1.99
SMPD1-209ENST00000533196 ADD3Q9UEY8 706 aaKnown RBP27.49■■□□□ 1.99
SMPD1-209ENST00000533196 LTBP2Q14767 1821 aa27.48■■□□□ 1.99
SMPD1-209ENST00000533196 CHMLP26374 656 aa27.48■■□□□ 1.99
SMPD1-209ENST00000533196 ACLYP53396 1101 aa27.48■■□□□ 1.99
SMPD1-209ENST00000533196 GJA9P57773 515 aa27.48■■□□□ 1.99
SMPD1-209ENST00000533196 MDM2Q00987 491 aaPredicted RBP27.48■■□□□ 1.99
SMPD1-209ENST00000533196 LRIT3Q3SXY7 679 aa27.48■■□□□ 1.99
SMPD1-209ENST00000533196 CCSAPQ6IQ19 270 aaPredicted RBP27.48■■□□□ 1.99
SMPD1-209ENST00000533196 NKX3-2P78367 333 aa27.47■■□□□ 1.99
SMPD1-209ENST00000533196 ENAHQ8N8S7 591 aaPredicted RBP27.47■■□□□ 1.99
SMPD1-209ENST00000533196 MORC4Q8TE76 937 aa27.47■■□□□ 1.99
SMPD1-209ENST00000533196 UBAC1Q9BSL1 405 aa27.47■■□□□ 1.99
SMPD1-209ENST00000533196 MAF1Q9H063 256 aa27.47■■□□□ 1.99
SMPD1-209ENST00000533196 LRRC37A2A6NM11 1700 aa27.47■■□□□ 1.99
SMPD1-209ENST00000533196 TNKSO95271 1327 aa27.46■■□□□ 1.99
SMPD1-209ENST00000533196 GPR153Q6NV75 609 aa27.46■■□□□ 1.99
SMPD1-209ENST00000533196 STARD7Q9NQZ5 370 aa27.46■■□□□ 1.99
SMPD1-209ENST00000533196 ADCY6O43306 1168 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 C6orf222P0C671 652 aaPredicted RBP27.45■■□□□ 1.98
SMPD1-209ENST00000533196 TNFAIP2Q03169 654 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 TLE2Q04725 743 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 KCNA10Q16322 511 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 ASPRV1Q53RT3 343 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 TOX2Q96NM4 488 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 VTA1Q9NP79 307 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 PDLIM7Q9NR12 457 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 U3KPZ7 1027 aaPredicted RBP27.45■■□□□ 1.98
SMPD1-209ENST00000533196 MYH6P13533 1939 aa27.45■■□□□ 1.98
SMPD1-209ENST00000533196 ASTN1O14525 1302 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 ELP1O95163 1332 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 NFIBO00712 420 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 TRDNQ13061 729 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 BAATQ14032 418 aaPredicted RBP27.44■■□□□ 1.98
SMPD1-209ENST00000533196 IQSEC1Q6DN90 963 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 CLEC4DQ8WXI8 215 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 GLT1D1Q96MS3 346 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 Q9Y3F1 56 aa27.44■■□□□ 1.98
SMPD1-209ENST00000533196 SOX1O00570 391 aaPredicted RBP27.43■■□□□ 1.98
SMPD1-209ENST00000533196 GOLGA8HP0CJ92 632 aa27.43■■□□□ 1.98
SMPD1-209ENST00000533196 RNF207Q6ZRF8 634 aa27.43■■□□□ 1.98
SMPD1-209ENST00000533196 RGS22Q8NE09 1264 aa27.43■■□□□ 1.98
SMPD1-209ENST00000533196 MPHOSPH6Q99547 160 aaKnown RBP27.43■■□□□ 1.98
SMPD1-209ENST00000533196 PRDM5Q9NQX1 630 aaPredicted RBP27.43■■□□□ 1.98
SMPD1-209ENST00000533196 GNEQ9Y223 722 aaKnown RBP27.43■■□□□ 1.98
SMPD1-209ENST00000533196 PTPDC1A2A3K4 754 aa27.42■■□□□ 1.98
SMPD1-209ENST00000533196 MYADML2A6NDP7 307 aa27.42■■□□□ 1.98
SMPD1-209ENST00000533196 SGSM2O43147 1006 aa27.42■■□□□ 1.98
SMPD1-209ENST00000533196 CLTBP09497 229 aa27.42■■□□□ 1.98
SMPD1-209ENST00000533196 ALDH5A1P51649 535 aaPredicted RBP27.42■■□□□ 1.98
SMPD1-209ENST00000533196 ANKRD33Q7Z3H0 272 aa27.42■■□□□ 1.98
SMPD1-209ENST00000533196 LAMA3Q16787 3333 aa27.42■■□□□ 1.98
SMPD1-209ENST00000533196 MROH7Q68CQ1 1323 aa27.41■■□□□ 1.98
SMPD1-209ENST00000533196 ASGR1P07306 291 aa27.41■■□□□ 1.98
SMPD1-209ENST00000533196 PARP1P09874 1014 aaKnown RBP27.41■■□□□ 1.98
SMPD1-209ENST00000533196 GNASQ5JWF2 1037 aa27.41■■□□□ 1.98
SMPD1-209ENST00000533196 IFIT1BQ5T764 474 aaKnown RBP27.41■■□□□ 1.98
SMPD1-209ENST00000533196 UBA5Q9GZZ9 404 aa27.41■■□□□ 1.98
SMPD1-209ENST00000533196 SZT2Q5T011 3432 aa27.41■■□□□ 1.98
SMPD1-209ENST00000533196 CYP21A2P08686 494 aa27.4■■□□□ 1.98
SMPD1-209ENST00000533196 SEC23AQ15436 765 aa27.4■■□□□ 1.98
SMPD1-209ENST00000533196 CDC37Q16543 378 aaPredicted RBP27.4■■□□□ 1.98
SMPD1-209ENST00000533196 TAPT1Q6NXT6 567 aa27.4■■□□□ 1.98
SMPD1-209ENST00000533196 NOL8Q76FK4 1167 aaKnown RBP27.4■■□□□ 1.98
SMPD1-209ENST00000533196 DNERQ8NFT8 737 aa27.4■■□□□ 1.98
SMPD1-209ENST00000533196 LRCH3Q96II8 777 aa27.4■■□□□ 1.98
SMPD1-209ENST00000533196 ABCB11O95342 1321 aa27.4■■□□□ 1.98
SMPD1-209ENST00000533196 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.39■■□□□ 1.98
SMPD1-209ENST00000533196 TRIM43BA6NCK2 446 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 DCDC2CA8MYV0 355 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 B4DLN1 442 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 KIAA0355O15063 1070 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 CTAGE5O15320 804 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 MRPL12P52815 198 aaKnown RBP27.39■■□□□ 1.98
SMPD1-209ENST00000533196 RPS6P62753 249 aaKnown RBP27.39■■□□□ 1.98
SMPD1-209ENST00000533196 PTH1RQ03431 593 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 TLK2Q86UE8 772 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 TRIM43Q96BQ3 446 aaPredicted RBP27.39■■□□□ 1.98
SMPD1-209ENST00000533196 AP5M1Q9H0R1 490 aa27.39■■□□□ 1.98
SMPD1-209ENST00000533196 ZEB2O60315 1214 aa27.38■■□□□ 1.97
SMPD1-209ENST00000533196 PQBP1O60828 265 aaKnown RBP27.38■■□□□ 1.97
SMPD1-209ENST00000533196 CABYRO75952 493 aa27.38■■□□□ 1.97
SMPD1-209ENST00000533196 SMPD1P17405 629 aa27.38■■□□□ 1.97
SMPD1-209ENST00000533196 CALML3P27482 149 aa27.38■■□□□ 1.97
SMPD1-209ENST00000533196 SLC30A10Q6XR72 485 aa27.38■■□□□ 1.97
SMPD1-209ENST00000533196 SH3RF1Q7Z6J0 888 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms