RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
PMS2P3-208ENST00000533167 TRPM7Q96QT4 1865 aa9.8□□□□□ -0.84
PMS2P3-208ENST00000533167 ABCB11O95342 1321 aa9.8□□□□□ -0.84
PMS2P3-208ENST00000533167 PARP14Q460N5 1801 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 XBP1P17861 261 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 KRT2P35908 639 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 HSD17B4P51659 736 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 ZNF157P51786 506 aaPredicted RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 HERVK_113P62684 666 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 DNM1Q05193 864 aaKnown RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 MKRN3Q13064 507 aaKnown RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 TRIM29Q14134 588 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 PTPAQ15257 358 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 MUM1L1Q5H9M0 696 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 CCDC174Q6PII3 467 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 MB21D1Q8N884 522 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 TMEM87AQ8NBN3 555 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 CCDC12Q8WUD4 166 aaPredicted RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 USP28Q96RU2 1077 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 FTOQ9C0B1 505 aaKnown RBP eCLIP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 TMEM260Q9NX78 707 aa9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 ISY1Q9ULR0 285 aaKnown RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 MORC2Q9Y6X9 1032 aaPredicted RBP9.79□□□□□ -0.84
PMS2P3-208ENST00000533167 MANSC4A6NHS7 340 aaPredicted RBP9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 PDHXO00330 501 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 NFIBO00712 420 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 ZBED4O75132 1171 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 CYP2C8P10632 490 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 GNA11P29992 359 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 NASPP49321 788 aaPredicted RBP9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 APLP1P51693 650 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 ADCY7P51828 1080 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 UBE2SQ16763 222 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 USH1GQ495M9 461 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 USP17L6PQ6QN14 398 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 RIOX2Q8IUF8 465 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 TEX13BQ9BXU2 312 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 PSTPIP2Q9H939 334 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 C6orf50Q9HD87 102 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 ZCCHC17Q9NP64 241 aaKnown RBP9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 COL20A1Q9P218 1284 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 MORF4L1Q9UBU8 362 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 RCOR1Q9UKL0 485 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 CCPG1Q9ULG6 757 aa9.78□□□□□ -0.84
PMS2P3-208ENST00000533167 TM4SF4P48230 202 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 TRAPPC10P48553 1259 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 IRX3P78415 501 aaPredicted RBP9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 TRAF1Q13077 416 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 SAFBQ15424 915 aaKnown RBP eCLIP9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 Q3C1V9 767 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 TKFCQ3LXA3 575 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 ATL3Q6DD88 541 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 MCTP1Q6DN14 999 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 CUL5Q93034 780 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 CCDC102AQ96A19 550 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 MBOAT7Q96N66 472 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 MOV10L1Q9BXT6 1211 aaKnown RBP9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 MAF1Q9H063 256 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 RTEL1Q9NZ71 1219 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 CNPY2Q9Y2B0 182 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 FRMPD4Q14CM0 1322 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 RPTORQ8N122 1335 aa9.77□□□□□ -0.85
PMS2P3-208ENST00000533167 BCRP11274 1271 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 ALAS1P13196 640 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 OSBPP22059 807 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 MCM4P33991 863 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 STAT3P40763 770 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 MRPL12P52815 198 aaKnown RBP9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 PABPC4Q13310 644 aaKnown RBP eCLIP9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 AP3B2Q13367 1082 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 NBR1Q14596 966 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 RILPL1Q5EBL4 403 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 JAKMIP3Q5VZ66 844 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 SNRNP48Q6IEG0 339 aaKnown RBP9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 CYP4F22Q6NT55 531 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 PIK3AP1Q6ZUJ8 805 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 KRT25Q7Z3Z0 450 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 CPXCR1Q8N123 301 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 SAMD3Q8N6K7 520 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 C4orf32Q8N8J7 132 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 LINC00301Q8NCQ3 95 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 BICD2Q8TD16 824 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 SYTL5Q8TDW5 730 aaPredicted RBP9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 PGBD1Q96JS3 809 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
PMS2P3-208ENST00000533167 RNF146Q9NTX7 359 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms