RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CDC37Q16543 378 aaPredicted RBP19.43■□□□□ 0.7
PKP3-209ENST00000533069 LRRC26Q2I0M4 334 aa19.43■□□□□ 0.7
PKP3-209ENST00000533069 STOX1Q6ZVD7 989 aa19.43■□□□□ 0.7
PKP3-209ENST00000533069 ANO2Q9NQ90 1003 aa19.43■□□□□ 0.7
PKP3-209ENST00000533069 COLQQ9Y215 455 aaPredicted RBP19.43■□□□□ 0.7
PKP3-209ENST00000533069 DUSP11O75319 330 aaKnown RBP19.42■□□□□ 0.7
PKP3-209ENST00000533069 CDC45O75419 566 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 MYCNP04198 464 aaPredicted RBP19.42■□□□□ 0.7
PKP3-209ENST00000533069 WTAPQ15007 396 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 HABP4Q5JVS0 413 aaKnown RBP19.42■□□□□ 0.7
PKP3-209ENST00000533069 CHRDL2Q6WN34 429 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 MB21D2Q8IYB1 491 aaPredicted RBP19.42■□□□□ 0.7
PKP3-209ENST00000533069 ADGRF4Q8IZF3 695 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 CLEC4DQ8WXI8 215 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 MTA3Q9BTC8 594 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 KATNBL1Q9H079 304 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 CPVLQ9H3G5 476 aa19.42■□□□□ 0.7
PKP3-209ENST00000533069 ZNFX1Q9P2E3 1918 aaKnown RBP19.41■□□□□ 0.7
PKP3-209ENST00000533069 PTPDC1A2A3K4 754 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 DHX16O60231 1041 aaKnown RBP19.41■□□□□ 0.7
PKP3-209ENST00000533069 ADAMTS4O75173 837 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 PGK1P00558 417 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 BAATQ14032 418 aaPredicted RBP19.41■□□□□ 0.7
PKP3-209ENST00000533069 CCDC144BQ3MJ40 725 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 RNF207Q6ZRF8 634 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 RGS22Q8NE09 1264 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 PHF24Q9UPV7 400 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 ABCB11O95342 1321 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
PKP3-209ENST00000533069 KLRF2D3W0D1 207 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 SLC27A2O14975 620 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
PKP3-209ENST00000533069 USH1GQ495M9 461 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 TMEM67Q5HYA8 995 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 MORC4Q8TE76 937 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 LENG1Q96BZ8 264 aaPredicted RBP19.4■□□□□ 0.7
PKP3-209ENST00000533069 MPHOSPH6Q99547 160 aaKnown RBP19.4■□□□□ 0.7
PKP3-209ENST00000533069 TSEN34Q9BSV6 310 aaKnown RBP19.4■□□□□ 0.7
PKP3-209ENST00000533069 JMJD4Q9H9V9 463 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 SPC25Q9HBM1 224 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 ASTN1O14525 1302 aa19.4■□□□□ 0.7
PKP3-209ENST00000533069 PALM3A6NDB9 673 aaPredicted RBP19.39■□□□□ 0.69
PKP3-209ENST00000533069 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.69
PKP3-209ENST00000533069 ATN1P54259 1190 aaPredicted RBP19.39■□□□□ 0.69
PKP3-209ENST00000533069 ANTXR2P58335 489 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 GRM4Q14833 912 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 NECTIN1Q15223 517 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 QRICH1Q2TAL8 776 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 RNF20Q5VTR2 975 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 CREB3L3Q68CJ9 461 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 SLC30A10Q6XR72 485 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 CATIPQ7Z7H3 387 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 PRO3102Q9H379 93 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 VTA1Q9NP79 307 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
PKP3-209ENST00000533069 ZMYND8Q9ULU4 1186 aaPredicted RBP19.39■□□□□ 0.69
PKP3-209ENST00000533069 CEP290O15078 2479 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 CALML3P27482 149 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 CST5P28325 142 aaPredicted RBP19.38■□□□□ 0.69
PKP3-209ENST00000533069 MCM5P33992 734 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 RPS6P62753 249 aaKnown RBP19.38■□□□□ 0.69
PKP3-209ENST00000533069 TROAPQ12815 778 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 SNX17Q15036 470 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 C1orf53Q5VUE5 145 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 SLC39A5Q6ZMH5 540 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 FBXO11Q86XK2 927 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 MCF2L2Q86YR7 1114 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 STAG2Q8N3U4 1231 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 DNERQ8NFT8 737 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 IGDCC4Q8TDY8 1250 aa19.38■□□□□ 0.69
PKP3-209ENST00000533069 UPF3AQ9H1J1 476 aaKnown RBP19.38■□□□□ 0.69
PKP3-209ENST00000533069 A0A1W2PPC1 479 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 MOXD2PA6NHM9 499 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 B4DLN1 442 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 PRC1O43663 620 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 MRPL12P52815 198 aaKnown RBP19.37■□□□□ 0.69
PKP3-209ENST00000533069 GJA9P57773 515 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 RTP1P59025 263 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 TRAF1Q13077 416 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 KLHDC9Q8NEP7 349 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 MTMR8Q96EF0 704 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 TMEM87BQ96K49 555 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 PURBQ96QR8 312 aaKnown RBP19.37■□□□□ 0.69
PKP3-209ENST00000533069 AMNQ9BXJ7 453 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 VAT1LQ9HCJ6 419 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 RBM27Q9P2N5 1060 aaKnown RBP19.37■□□□□ 0.69
PKP3-209ENST00000533069 MRPL11Q9Y3B7 192 aaKnown RBP19.37■□□□□ 0.69
PKP3-209ENST00000533069 ALPK3Q96L96 1907 aa19.37■□□□□ 0.69
PKP3-209ENST00000533069 A0A1W2PQ45 241 aaPredicted RBP19.36■□□□□ 0.69
PKP3-209ENST00000533069 A0A1W2PQY0 241 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 ZBTB5O15062 677 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 ADCY6O43306 1168 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 DDAH1O94760 285 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 C6orf222P0C671 652 aaPredicted RBP19.36■□□□□ 0.69
PKP3-209ENST00000533069 SYN1P17600 705 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 ACLYP53396 1101 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 NKX3-2P78367 333 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms