RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 RPGRIP1Q96KN7 1286 aa8.9□□□□□ -0.98
CTNND1-234ENST00000532844 PRDM15P57071 1507 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-234ENST00000532844 XRCC5P13010 732 aaKnown RBP8.9□□□□□ -0.99
CTNND1-234ENST00000532844 TMED1Q13445 227 aa8.9□□□□□ -0.99
CTNND1-234ENST00000532844 SPATA1Q5VX52 437 aa8.9□□□□□ -0.99
CTNND1-234ENST00000532844 DENND2CQ68D51 928 aa8.9□□□□□ -0.99
CTNND1-234ENST00000532844 NEK8Q86SG6 692 aa8.9□□□□□ -0.99
CTNND1-234ENST00000532844 LRRC47Q8N1G4 583 aaKnown RBP8.9□□□□□ -0.99
CTNND1-234ENST00000532844 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.99
CTNND1-234ENST00000532844 PSTPIP2Q9H939 334 aa8.9□□□□□ -0.99
CTNND1-234ENST00000532844 MAP3K15Q6ZN16 1313 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 GAS7O60861 476 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 CIAO1O76071 339 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 GFAPP14136 432 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 DNM2P50570 870 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 TRIM60Q495X7 471 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 NSMFQ6X4W1 530 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 NBPF3Q9H094 633 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 HYOU1Q9Y4L1 999 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 MBD5Q9P267 1494 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 DAPK3O43293 454 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 LONP1P36776 959 aaKnown RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 PHKA1P46020 1223 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 HOOK2Q96ED9 719 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 PPP1R13BQ96KQ4 1090 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 RAB17Q9H0T7 212 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 DDX25Q9UHL0 483 aaKnown RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 EFCAB8A8MWE9 144 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 H7C1D1 291 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 COBLO75128 1261 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 BAG2O95816 211 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 KRT19P08727 400 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 ATP6V1E1P36543 226 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 ZSCAN26Q16670 478 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 SLC5A4Q9NY91 659 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 NRBP1Q9UHY1 535 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 ZNF215Q9UL58 517 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 MKL2Q9ULH7 1088 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 METP08581 1390 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 KCNK3O14649 394 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 STK10O94804 968 aaKnown RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 ABCB4P21439 1286 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 SF3A3Q12874 501 aaKnown RBP eCLIP8.89□□□□□ -0.992e-7■■■□□ 14.9
CTNND1-234ENST00000532844 PPP2R5AQ15172 486 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 CCDC92Q53HC0 331 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 LGSNQ5TDP6 509 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 SUPT20HQ8NEM7 779 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 SLC39A2Q9NP94 309 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 EFCAB6Q5THR3 1501 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 A0A1W2PQ27 194 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 A0A1W2PQ64 194 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 A0A1W2PQD8 194 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 ARHGAP42A6NI28 874 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 KLRF2D3W0D1 207 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-234ENST00000532844 BTDP43251 543 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 PTGDRQ13258 359 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 UBE3CQ15386 1083 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 FAM102BQ5T8I3 360 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 SRGAP1Q7Z6B7 1085 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 GIMAP4Q9NUV9 329 aa8.89□□□□□ -0.99
CTNND1-234ENST00000532844 ERBB4Q15303 1308 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 PPP6R2O75170 966 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 KRT3P12035 628 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 ESRRGP62508 458 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 NSUN7Q8NE18 718 aaKnown RBP8.88□□□□□ -0.99
CTNND1-234ENST00000532844 TDRD7Q8NHU6 1098 aaKnown RBP8.88□□□□□ -0.99
CTNND1-234ENST00000532844 SDCCAG3Q96C92 435 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 TBC1D8O95759 1140 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 CYP21A2P08686 494 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 STAT1P42224 750 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 PTPROQ16827 1216 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 KRT71Q3SY84 523 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 GALNT17Q6IS24 598 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 C11orf57Q6ZUT1 292 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-234ENST00000532844 SLFN12Q8IYM2 578 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 TEKT1Q969V4 418 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 PARP2Q9UGN5 583 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 IGSF1Q8N6C5 1336 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 ZRANB2O95218 330 aaKnown RBP eCLIP8.88□□□□□ -0.997e-11■■■■■ 70
CTNND1-234ENST00000532844 TROVE2P10155 538 aaKnown RBP eCLIP8.88□□□□□ -0.99
CTNND1-234ENST00000532844 TNNI1P19237 187 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 CTNNA1P35221 906 aaKnown RBP8.88□□□□□ -0.99
CTNND1-234ENST00000532844 POLR2FP61218 127 aaKnown RBP8.88□□□□□ -0.99
CTNND1-234ENST00000532844 GOLGA8FQ08AF8 430 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 GOLGA8DPQ0D2H9 430 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 FBXO18Q8NFZ0 1043 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 MGARPQ8TDB4 240 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 MAIP1Q8WWC4 291 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 RILPQ96NA2 401 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 PCDHA12Q9UN75 941 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 PPME1Q9Y570 386 aa8.88□□□□□ -0.99
CTNND1-234ENST00000532844 YEATS2Q9ULM3 1422 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms