RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 PPP1R7Q15435 360 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 MRPL11Q9Y3B7 192 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 BCRP11274 1271 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 HARSP12081 509 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 GCFC2P16383 781 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 PTPN21Q16825 1174 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 P2RX5Q93086 422 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 PAGE5Q96GU1 130 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 NSRP1Q9H0G5 558 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 AFAP1L1Q8TED9 768 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 UBLCP1Q8WVY7 318 aaPredicted RBP16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 COL4A3BPQ9Y5P4 624 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 POLR2MP0CAP2 368 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 STAT1P42224 750 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 CCDC25Q86WR0 208 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 ENAHQ8N8S7 591 aaPredicted RBP16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 MSANTD4Q8NCY6 345 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 CTTNBP2NLQ9P2B4 639 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 CHGBP05060 677 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 PEX26Q7Z412 305 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 ZNF579Q8NAF0 562 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 STK17AQ9UEE5 414 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
PCDHA3-202ENST00000532566 CDK8P49336 464 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 SYCE1Q8N0S2 351 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 RBL2Q08999 1139 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 STRN3Q13033 797 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 ADAM9Q13443 819 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 MIER3Q7Z3K6 550 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 UBL4BQ8N7F7 174 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 TRIM37O94972 964 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 PAK2Q13177 524 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 IWS1Q96ST2 819 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 METTL14Q9HCE5 456 aaKnown RBP16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 RDH13Q8NBN7 331 aa16.92■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLGA6BA6NDN3 693 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 SMIM23A6NLE4 172 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 KIF4AO95239 1232 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 CSF1RP07333 972 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 CYP2D6P10635 497 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 COA7Q96BR5 231 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 LRRC45Q96CN5 670 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 SELENOSQ9BQE4 189 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 CDC23Q9UJX2 597 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 SND1Q7KZF4 910 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 KLHL7Q8IXQ5 586 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 FAM178BQ8IXR5 827 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 HYOU1Q9Y4L1 999 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 TCP1P17987 556 aaKnown RBP16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 KCTD1Q719H9 257 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 LARSQ9P2J5 1176 aaKnown RBP16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 MROH1Q8NDA8 1641 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 OVOS2A0A0G2JMS6 1433 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 ATP2C2O75185 946 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 CYP2J2P51589 502 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 ARHGAP44Q17R89 818 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 GBP6Q6ZN66 633 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLGA6CA6NDK9 693 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLGA6DP0CG33 693 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 POLR2FP61218 127 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 SPTLC3Q9NUV7 552 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLGA6AQ9NYA3 693 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 PHLPP2Q6ZVD8 1323 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 CCNE1P24864 410 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 SLC16A2P36021 539 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 UTP11Q9Y3A2 253 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 ALAS1P13196 640 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 DPH6Q7L8W6 267 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 CCDC114Q96M63 670 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 MYO1AQ9UBC5 1043 aa16.9■□□□□ 0.3
PCDHA3-202ENST00000532566 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms