RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FLT3LGP49771 235 aa25.79■■□□□ 1.72
LRRK1-208ENST00000532029 GRB14Q14449 540 aa25.79■■□□□ 1.72
LRRK1-208ENST00000532029 PKN2Q16513 984 aaKnown RBP25.79■■□□□ 1.72
LRRK1-208ENST00000532029 ABRAQ8N0Z2 381 aa25.79■■□□□ 1.72
LRRK1-208ENST00000532029 ANKRD35Q8N283 1001 aa25.79■■□□□ 1.72
LRRK1-208ENST00000532029 GABRQQ9UN88 632 aa25.79■■□□□ 1.72
LRRK1-208ENST00000532029 LIMCH1Q9UPQ0 1083 aa25.79■■□□□ 1.72
LRRK1-208ENST00000532029 RGS2P41220 211 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 FUT2Q10981 343 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 MAP2K5Q13163 448 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 MORN1Q5T089 497 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 RAET1EQ8TD07 263 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 DDX11Q96FC9 970 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 GJD2Q9UKL4 321 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 PTPN22Q9Y2R2 807 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 MRPL11Q9Y3B7 192 aaKnown RBP25.78■■□□□ 1.72
LRRK1-208ENST00000532029 PCDHA1Q9Y5I3 950 aa25.78■■□□□ 1.72
LRRK1-208ENST00000532029 PPP1R11O60927 126 aaPredicted RBP25.77■■□□□ 1.72
LRRK1-208ENST00000532029 ADORA2AP29274 412 aa25.77■■□□□ 1.72
LRRK1-208ENST00000532029 ME3Q16798 604 aa25.77■■□□□ 1.72
LRRK1-208ENST00000532029 MUM1L1Q5H9M0 696 aa25.77■■□□□ 1.72
LRRK1-208ENST00000532029 DPP9Q86TI2 863 aa25.77■■□□□ 1.72
LRRK1-208ENST00000532029 SLC5A4Q9NY91 659 aa25.77■■□□□ 1.72
LRRK1-208ENST00000532029 V9GY48 417 aaPredicted RBP25.77■■□□□ 1.72
LRRK1-208ENST00000532029 hCG_1642624A0A1W2PR95 340 aa25.76■■□□□ 1.71
LRRK1-208ENST00000532029 IFNAR1P17181 557 aa25.76■■□□□ 1.71
LRRK1-208ENST00000532029 CYP2B6P20813 491 aa25.76■■□□□ 1.71
LRRK1-208ENST00000532029 AKAP17AQ02040 695 aaKnown RBP25.76■■□□□ 1.71
LRRK1-208ENST00000532029 SCRN1Q12765 414 aa25.76■■□□□ 1.71
LRRK1-208ENST00000532029 FBXO46Q6PJ61 603 aaPredicted RBP25.76■■□□□ 1.71
LRRK1-208ENST00000532029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.76■■□□□ 1.71
LRRK1-208ENST00000532029 ZSCAN31Q96LW9 406 aaPredicted RBP25.76■■□□□ 1.71
LRRK1-208ENST00000532029 RBM27Q9P2N5 1060 aaKnown RBP25.76■■□□□ 1.71
LRRK1-208ENST00000532029 PLXNB2O15031 1838 aa25.76■■□□□ 1.71
LRRK1-208ENST00000532029 PFASO15067 1338 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 CDKL5O76039 1030 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 LARGE1O95461 756 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 IRF5Q13568 498 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 NTRK3Q16288 839 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 NSMFQ6X4W1 530 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 APBA2Q99767 749 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 PTCH2Q9Y6C5 1203 aa25.75■■□□□ 1.71
LRRK1-208ENST00000532029 NFIBO00712 420 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 MCM2P49736 904 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 TRIM22Q8IYM9 498 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 NECAB1Q8N987 351 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 CLEC4DQ8WXI8 215 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 USP6NLQ92738 828 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 PHKBQ93100 1093 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 GTF3C6Q969F1 213 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 SLC26A6Q9BXS9 759 aa25.74■■□□□ 1.71
LRRK1-208ENST00000532029 RNF26Q9BY78 433 aaPredicted RBP25.74■■□□□ 1.71
LRRK1-208ENST00000532029 A1CFQ9NQ94 594 aaKnown RBP25.74■■□□□ 1.71
LRRK1-208ENST00000532029 MYH6P13533 1939 aa25.73■■□□□ 1.71
LRRK1-208ENST00000532029 ZNF236Q9UL36 1845 aa25.73■■□□□ 1.71
LRRK1-208ENST00000532029 PRPF3O43395 683 aaKnown RBP25.73■■□□□ 1.71
LRRK1-208ENST00000532029 SSRP1Q08945 709 aaKnown RBP25.73■■□□□ 1.71
LRRK1-208ENST00000532029 HEATR3Q7Z4Q2 680 aa25.73■■□□□ 1.71
LRRK1-208ENST00000532029 MCF2L2Q86YR7 1114 aa25.73■■□□□ 1.71
LRRK1-208ENST00000532029 MCOLN1Q9GZU1 580 aa25.73■■□□□ 1.71
LRRK1-208ENST00000532029 BAZ2BQ9UIF8 2168 aaKnown RBP25.72■■□□□ 1.71
LRRK1-208ENST00000532029 PTPDC1A2A3K4 754 aa25.72■■□□□ 1.71
LRRK1-208ENST00000532029 POTEB2H3BUK9 544 aa25.72■■□□□ 1.71
LRRK1-208ENST00000532029 CAPN15O75808 1086 aa25.72■■□□□ 1.71
LRRK1-208ENST00000532029 PGK2P07205 417 aa25.72■■□□□ 1.71
LRRK1-208ENST00000532029 XRCC5P13010 732 aaKnown RBP25.72■■□□□ 1.71
LRRK1-208ENST00000532029 RNF207Q6ZRF8 634 aa25.72■■□□□ 1.71
LRRK1-208ENST00000532029 SH2B1Q9NRF2 756 aaPredicted RBP25.72■■□□□ 1.71
LRRK1-208ENST00000532029 CYP39A1Q9NYL5 469 aa25.72■■□□□ 1.71
LRRK1-208ENST00000532029 hCG_1984214I3L0E3 225 aa25.71■■□□□ 1.71
LRRK1-208ENST00000532029 ADCY3O60266 1144 aa25.71■■□□□ 1.71
LRRK1-208ENST00000532029 COBLO75128 1261 aa25.71■■□□□ 1.71
LRRK1-208ENST00000532029 HOXC6P09630 235 aa25.71■■□□□ 1.71
LRRK1-208ENST00000532029 TRMT44Q8IYL2 757 aaKnown RBP25.71■■□□□ 1.71
LRRK1-208ENST00000532029 ZNF713Q8N859 430 aaPredicted RBP25.71■■□□□ 1.71
LRRK1-208ENST00000532029 RGS22Q8NE09 1264 aa25.71■■□□□ 1.71
LRRK1-208ENST00000532029 GPKOWQ92917 476 aaPredicted RBP eCLIP25.71■■□□□ 1.71
LRRK1-208ENST00000532029 PPFIA3O75145 1194 aa25.7■■□□□ 1.7
LRRK1-208ENST00000532029 SCG2P13521 617 aa25.7■■□□□ 1.7
LRRK1-208ENST00000532029 BAATQ14032 418 aaPredicted RBP25.7■■□□□ 1.7
LRRK1-208ENST00000532029 PFKFB3Q16875 520 aaPredicted RBP25.7■■□□□ 1.7
LRRK1-208ENST00000532029 SLAIN1Q8ND83 568 aa25.7■■□□□ 1.7
LRRK1-208ENST00000532029 NPLOC4Q8TAT6 608 aa25.7■■□□□ 1.7
LRRK1-208ENST00000532029 PXYLP1Q8TE99 480 aa25.7■■□□□ 1.7
LRRK1-208ENST00000532029 MAF1Q9H063 256 aa25.7■■□□□ 1.7
LRRK1-208ENST00000532029 DNAJC25-GNG10A0A024R161 153 aa25.69■■□□□ 1.7
LRRK1-208ENST00000532029 CALML3P27482 149 aa25.69■■□□□ 1.7
LRRK1-208ENST00000532029 GRK4P32298 578 aa25.69■■□□□ 1.7
LRRK1-208ENST00000532029 ZNF792Q3KQV3 632 aa25.69■■□□□ 1.7
LRRK1-208ENST00000532029 WWC2Q6AWC2 1192 aa25.69■■□□□ 1.7
LRRK1-208ENST00000532029 DIS3Q9Y2L1 958 aaKnown RBP25.69■■□□□ 1.7
LRRK1-208ENST00000532029 DOCK3Q8IZD9 2030 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 DEXIO95424 95 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 CFBP00751 764 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 ELNP15502 786 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 RPS6P62753 249 aaKnown RBP25.68■■□□□ 1.7
LRRK1-208ENST00000532029 SLC9C1Q4G0N8 1177 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 PPP1R18Q6NYC8 613 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 SLC30A10Q6XR72 485 aa25.68■■□□□ 1.7
LRRK1-208ENST00000532029 CCDC83Q8IWF9 413 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms