RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 LENG1Q96BZ8 264 aaPredicted RBP21.84■■□□□ 1.09
GMDS-208ENST00000530927 NEK1Q96PY6 1258 aa21.84■■□□□ 1.09
GMDS-208ENST00000530927 OGDHLQ9ULD0 1010 aa21.84■■□□□ 1.09
GMDS-208ENST00000530927 MCM3APO60318 1980 aa21.84■■□□□ 1.09
GMDS-208ENST00000530927 POTEB2H3BUK9 544 aa21.83■■□□□ 1.09
GMDS-208ENST00000530927 BAATQ14032 418 aaPredicted RBP21.83■■□□□ 1.09
GMDS-208ENST00000530927 SLC30A10Q6XR72 485 aa21.83■■□□□ 1.09
GMDS-208ENST00000530927 ZNF654Q8IZM8 581 aa21.83■■□□□ 1.09
GMDS-208ENST00000530927 PAWRQ96IZ0 340 aaKnown RBP21.83■■□□□ 1.09
GMDS-208ENST00000530927 DDX20Q9UHI6 824 aaKnown RBP21.83■■□□□ 1.09
GMDS-208ENST00000530927 CYTH3O43739 400 aa21.82■■□□□ 1.08
GMDS-208ENST00000530927 PPP1R11O60927 126 aaPredicted RBP21.82■■□□□ 1.08
GMDS-208ENST00000530927 ZNF865P0CJ78 1059 aaPredicted RBP21.82■■□□□ 1.08
GMDS-208ENST00000530927 HSPA4P34932 840 aa21.82■■□□□ 1.08
GMDS-208ENST00000530927 CATIPQ7Z7H3 387 aa21.82■■□□□ 1.08
GMDS-208ENST00000530927 CCDC144CPQ8IYA2 1237 aa21.82■■□□□ 1.08
GMDS-208ENST00000530927 PIBF1Q8WXW3 757 aa21.82■■□□□ 1.08
GMDS-208ENST00000530927 SNX14Q9Y5W7 946 aa21.82■■□□□ 1.08
GMDS-208ENST00000530927 DNAH12Q6ZR08 3092 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 TSGA10IPQ3SY00 556 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 NFXL1Q6ZNB6 911 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 TBC1D5Q92609 795 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 KCNB2Q92953 911 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 TMEM87BQ96K49 555 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 WDR19Q8NEZ3 1342 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 MYH6P13533 1939 aa21.81■■□□□ 1.08
GMDS-208ENST00000530927 PTPDC1A2A3K4 754 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
GMDS-208ENST00000530927 MAMDC4Q6UXC1 1216 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 ARMCX2Q7L311 632 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 HOMER1Q86YM7 354 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
GMDS-208ENST00000530927 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.8■■□□□ 1.08
GMDS-208ENST00000530927 PFASO15067 1338 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 LRRC37A2A6NM11 1700 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 SEPT4O43236 478 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 CALML3P27482 149 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 MTMR8Q96EF0 704 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 JAKMIP1Q96N16 626 aaKnown RBP21.8■■□□□ 1.08
GMDS-208ENST00000530927 PIGSQ96S52 555 aa21.8■■□□□ 1.08
GMDS-208ENST00000530927 ZHX1Q9UKY1 873 aaPredicted RBP21.8■■□□□ 1.08
GMDS-208ENST00000530927 BAZ2BQ9UIF8 2168 aaKnown RBP21.79■■□□□ 1.08
GMDS-208ENST00000530927 SYNGAP1Q96PV0 1343 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 ADCY6O43306 1168 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 REC8O95072 547 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 PLEKHA8P1O95397 391 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 PTGS1P23219 599 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 ZNF467Q7Z7K2 595 aaPredicted RBP21.79■■□□□ 1.08
GMDS-208ENST00000530927 FBXO11Q86XK2 927 aa21.79■■□□□ 1.08
GMDS-208ENST00000530927 MYCNP04198 464 aaPredicted RBP21.78■■□□□ 1.08
GMDS-208ENST00000530927 RNF207Q6ZRF8 634 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 DHX32Q7L7V1 743 aaKnown RBP21.78■■□□□ 1.08
GMDS-208ENST00000530927 MTA3Q9BTC8 594 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 USP26Q9BXU7 913 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 KATNBL1Q9H079 304 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 RIOX1Q9H6W3 641 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 PCDH10Q9P2E7 1040 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 BRPF3Q9ULD4 1205 aa21.78■■□□□ 1.08
GMDS-208ENST00000530927 PDE4DIPQ5VU43 2346 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 DDAH1O94760 285 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 LIFRP42702 1097 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 RPS6P62753 249 aaKnown RBP21.77■■□□□ 1.08
GMDS-208ENST00000530927 IRX5P78411 483 aaPredicted RBP21.77■■□□□ 1.08
GMDS-208ENST00000530927 ACVR2BQ13705 512 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 GJC2Q5T442 439 aaPredicted RBP21.77■■□□□ 1.08
GMDS-208ENST00000530927 EEPD1Q7L9B9 569 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 MICU3Q86XE3 530 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 CNPY2Q9Y2B0 182 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 ALPK3Q96L96 1907 aa21.77■■□□□ 1.08
GMDS-208ENST00000530927 OPLAHO14841 1288 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 ZBTB5O15062 677 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 KRT32Q14532 448 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 SRBD1Q8N5C6 995 aaKnown RBP21.76■■□□□ 1.07
GMDS-208ENST00000530927 MSL3Q8N5Y2 521 aaKnown RBP21.76■■□□□ 1.07
GMDS-208ENST00000530927 ANKLE1Q8NAG6 615 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 COL20A1Q9P218 1284 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 SLC12A7Q9Y666 1083 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 ABCB11O95342 1321 aa21.76■■□□□ 1.07
GMDS-208ENST00000530927 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.75■■□□□ 1.07
GMDS-208ENST00000530927 PGK1P00558 417 aa21.75■■□□□ 1.07
GMDS-208ENST00000530927 TMEM63BQ5T3F8 832 aa21.75■■□□□ 1.07
GMDS-208ENST00000530927 NECAB2Q7Z6G3 386 aa21.75■■□□□ 1.07
GMDS-208ENST00000530927 SGMS1Q86VZ5 419 aa21.75■■□□□ 1.07
GMDS-208ENST00000530927 FBXO16Q8IX29 292 aaPredicted RBP21.75■■□□□ 1.07
GMDS-208ENST00000530927 CTCFLQ8NI51 663 aaPredicted RBP21.75■■□□□ 1.07
GMDS-208ENST00000530927 PDGFCQ9NRA1 345 aa21.75■■□□□ 1.07
GMDS-208ENST00000530927 hCG_1642624A0A1W2PR95 340 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 MSCO60682 206 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 ALDH5A1P51649 535 aaPredicted RBP21.74■■□□□ 1.07
GMDS-208ENST00000530927 CCDC144BQ3MJ40 725 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 TMTC2Q8N394 836 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 CCDC82Q8N4S0 544 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 DPF3Q92784 378 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 AMNQ9BXJ7 453 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 C11orf49Q9H6J7 331 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 NRBP1Q9UHY1 535 aa21.74■■□□□ 1.07
GMDS-208ENST00000530927 COL6A1P12109 1028 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 AKR1A1P14550 325 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 APOA5Q6Q788 366 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms