RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 BTBD18B2RXH4 712 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 F13A1P00488 732 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 OSBPP22059 807 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 HOXA7P31268 230 aaPredicted RBP12.25□□□□□ -0.45
SOX6-213ENST00000530378 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 CAPNS2Q96L46 248 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 PHF20Q9BVI0 1012 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 TMEM260Q9NX78 707 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 BTBD7Q9P203 1132 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
SOX6-213ENST00000530378 ICAM1P05362 532 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 KRT2P35908 639 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 ADCY7P51828 1080 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 NUCB2P80303 420 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 KIF23Q02241 960 aaPredicted RBP12.24□□□□□ -0.45
SOX6-213ENST00000530378 PABPC4Q13310 644 aaKnown RBP eCLIP12.24□□□□□ -0.45
SOX6-213ENST00000530378 NPY5RQ15761 445 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 DEFB115Q30KQ5 88 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 REPS2Q8NFH8 660 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 CCDC102AQ96A19 550 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 HOXC10Q9NYD6 342 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 BIN2Q9UBW5 565 aaPredicted RBP12.24□□□□□ -0.45
SOX6-213ENST00000530378 RIPK3Q9Y572 518 aa12.24□□□□□ -0.45
SOX6-213ENST00000530378 MANSC4A6NHS7 340 aaPredicted RBP12.23□□□□□ -0.45
SOX6-213ENST00000530378 NFIBO00712 420 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 HOXA13P31271 388 aaPredicted RBP12.23□□□□□ -0.45
SOX6-213ENST00000530378 RESTQ13127 1097 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
SOX6-213ENST00000530378 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
SOX6-213ENST00000530378 JAKMIP3Q5VZ66 844 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 ANKRD23Q86SG2 305 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 TBC1D5Q92609 795 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
SOX6-213ENST00000530378 R3HDMLQ9H3Y0 253 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 ZNF214Q9UL59 606 aaPredicted RBP12.23□□□□□ -0.45
SOX6-213ENST00000530378 MYH7BA7E2Y1 1941 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 RASSF10A6NK89 507 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 OPLAHO14841 1288 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 CNMDO75829 334 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 CFBP00751 764 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 CCDC12Q8WUD4 166 aaPredicted RBP12.23□□□□□ -0.45
SOX6-213ENST00000530378 FTOQ9C0B1 505 aaKnown RBP eCLIP12.23□□□□□ -0.45
SOX6-213ENST00000530378 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 BRMS1Q9HCU9 246 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 C6orf50Q9HD87 102 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 SH3GLB2Q9NR46 395 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
SOX6-213ENST00000530378 hCG_1984214I3L0E3 225 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 NBR1Q14596 966 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 TAF1CQ15572 869 aaPredicted RBP12.22□□□□□ -0.45
SOX6-213ENST00000530378 WDR78Q5VTH9 848 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 PIK3AP1Q6ZUJ8 805 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 ANKRD13CQ8N6S4 541 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 ZNF713Q8N859 430 aaPredicted RBP12.22□□□□□ -0.45
SOX6-213ENST00000530378 CUL5Q93034 780 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 PARK7Q99497 189 aaKnown RBP12.22□□□□□ -0.45
SOX6-213ENST00000530378 TEX13BQ9BXU2 312 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 ZMYND12Q9H0C1 365 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 ADAMTS5Q9UNA0 930 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 LCTP09848 1927 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 MYPNQ86TC9 1320 aa12.22□□□□□ -0.45
SOX6-213ENST00000530378 NCLP19338 710 aaKnown RBP12.21□□□□□ -0.45
SOX6-213ENST00000530378 CALML3P27482 149 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 STAT3P40763 770 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
SOX6-213ENST00000530378 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
SOX6-213ENST00000530378 HHIPL1Q96JK4 782 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 RBPJLQ9UBG7 517 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 CPA4Q9UI42 421 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 PCDHA6Q9UN73 950 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 PCDHA8Q9Y5H6 950 aa12.21□□□□□ -0.45
SOX6-213ENST00000530378 ABCB11O95342 1321 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 ZSWIM8A7E2V4 1837 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 PLXNB2O15031 1838 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 VEGFBP49765 207 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 SREBF2Q12772 1141 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 Q3C1V9 767 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 SLC30A10Q6XR72 485 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 CLEC4DQ8WXI8 215 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 MOV10L1Q9BXT6 1211 aaKnown RBP12.21□□□□□ -0.46
SOX6-213ENST00000530378 SPATC1LQ9H0A9 340 aa12.21□□□□□ -0.46
SOX6-213ENST00000530378 MRPL11Q9Y3B7 192 aaKnown RBP12.21□□□□□ -0.46
SOX6-213ENST00000530378 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms