RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 FRMPD3Q5JV73 1810 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 RPS6KB1P23443 525 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 CNGA1P29973 690 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 GNAQP50148 359 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 MDM2Q00987 491 aaPredicted RBP16.38■□□□□ 0.21
CTSB-217ENST00000530296 TROAPQ12815 778 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 TRAF1Q13077 416 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 GRM4Q14833 912 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 TKFCQ3LXA3 575 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 C8orf34Q49A92 452 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 OLFML2BQ68BL8 750 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 ZNF654Q8IZM8 581 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
CTSB-217ENST00000530296 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 ERCC3P19447 782 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 RCAN1P53805 252 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 SNRNP48Q6IEG0 339 aaKnown RBP16.37■□□□□ 0.21
CTSB-217ENST00000530296 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 DPP9Q86TI2 863 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 REPS2Q8NFH8 660 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 NUP133Q8WUM0 1156 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
CTSB-217ENST00000530296 ZSWIM6Q9HCJ5 1215 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 UNC80Q8N2C7 3258 aa16.37■□□□□ 0.21
CTSB-217ENST00000530296 PALM3A6NDB9 673 aaPredicted RBP16.36■□□□□ 0.21
CTSB-217ENST00000530296 KBTBD13C9JR72 458 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
CTSB-217ENST00000530296 PEX10O60683 326 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 ICAM1P05362 532 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 FCER1AP12319 257 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 SLC16A2P36021 539 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 ZNF697Q5TEC3 545 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 TTBK2Q6IQ55 1244 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 CHST13Q8NET6 341 aa16.36■□□□□ 0.21
CTSB-217ENST00000530296 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 LAMA2P24043 3122 aaKnown RBP16.35■□□□□ 0.21
CTSB-217ENST00000530296 CYBAP13498 195 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 KCTD2Q14681 263 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
CTSB-217ENST00000530296 FLRT1Q9NZU1 646 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
CTSB-217ENST00000530296 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 SEPT4O43236 478 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 ZBTB43O43298 467 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 IGHA2P01877 340 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 RTP1P59025 263 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 Q6ZUG5 572 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTSB-217ENST00000530296 ADGRF4Q8IZF3 695 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 MAF1Q9H063 256 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 SENP2Q9HC62 589 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
CTSB-217ENST00000530296 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
CTSB-217ENST00000530296 SEC24BO95487 1268 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 ADORA2AP29274 412 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 CYP2C19P33261 490 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 ANKRD1Q15327 319 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.33■□□□□ 0.2
CTSB-217ENST00000530296 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 NPLOC4Q8TAT6 608 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 TCEANC2Q96MN5 208 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 MMP19Q99542 508 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 ACAD9Q9H845 621 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
CTSB-217ENST00000530296 NRBP1Q9UHY1 535 aa16.33■□□□□ 0.2
CTSB-217ENST00000530296 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.2
CTSB-217ENST00000530296 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 ZNF536O15090 1300 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 ALAS1P13196 640 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
CTSB-217ENST00000530296 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
CTSB-217ENST00000530296 SLC39A5Q6ZMH5 540 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 STAG2Q8N3U4 1231 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 BRF1Q92994 677 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 SPZ1Q9BXG8 430 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
CTSB-217ENST00000530296 ZBTB5O15062 677 aa16.31■□□□□ 0.2
CTSB-217ENST00000530296 CPA1P15085 419 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms