RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-211ENST00000529073 KCNB2Q92953 911 aa13.34□□□□□ -0.27
CCDC90B-211ENST00000529073 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
CCDC90B-211ENST00000529073 CTDP1Q9Y5B0 961 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-211ENST00000529073 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 KLRF2D3W0D1 207 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 PPFIA3O75145 1194 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 SLC25A27O95847 323 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 ICAM1P05362 532 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 RGS19P49795 217 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 KCTD2Q14681 263 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 HOMER1Q86YM7 354 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 NEK1Q96PY6 1258 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 PIGSQ96S52 555 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 USP26Q9BXU7 913 aa13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 KIAA0100Q14667 2235 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-211ENST00000529073 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 SNAI1O95863 264 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 GJB1P08034 283 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 UBXN2AP68543 259 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 ASPRV1Q53RT3 343 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 LHX8Q68G74 356 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 MYH6P13533 1939 aa13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 BAZ2BQ9UIF8 2168 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-211ENST00000529073 CALML3P27482 149 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 CNGA1P29973 690 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 MCM5P33992 734 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 GJA8P48165 433 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 OAZ1P54368 228 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 C8orf34Q49A92 452 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 OLFML2BQ68BL8 750 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 NFXL1Q6ZNB6 911 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 UBE2Q1Q7Z7E8 422 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 MICU3Q86XE3 530 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 ABRAQ8N0Z2 381 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 ANKRD35Q8N283 1001 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 CCDC82Q8N4S0 544 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 TMEM106CQ9BVX2 250 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
CCDC90B-211ENST00000529073 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 MYADML2A6NDP7 307 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 STRNO43815 780 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 SGPL1O95470 568 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 ZNF865P0CJ78 1059 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 Q6ZUG5 572 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 HMX1Q9NP08 348 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 PDGFCQ9NRA1 345 aa13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-211ENST00000529073 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 ERICH2A1L162 156 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 PTPDC1A2A3K4 754 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 RPS6KB1P23443 525 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 CDC27P30260 824 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 MFSD14CQ5VZR4 134 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 DHX32Q7L7V1 743 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 CATIPQ7Z7H3 387 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 CHST13Q8NET6 341 aa13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 ZHX1Q9UKY1 873 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-211ENST00000529073 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 DDAH1O94760 285 aa13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 FARP2O94887 1054 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 TFRCP02786 760 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 HOXA13P31271 388 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 MLLT1Q03111 559 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 TOB2Q14106 344 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 RNF20Q5VTR2 975 aa13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 ARMCX2Q7L311 632 aa13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 BRF1Q92994 677 aa13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-211ENST00000529073 TMEM87BQ96K49 555 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms