RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 NFIBO00712 420 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 CDC45O75419 566 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 SYN1P17600 705 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 RNF207Q6ZRF8 634 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.67■□□□□ 0.26
CAPN1-216ENST00000528739 EEPD1Q7L9B9 569 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 FAM133AQ8N9E0 248 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
CAPN1-216ENST00000528739 LENG1Q96BZ8 264 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-216ENST00000528739 SOWAHBA6NEL2 793 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 SLC27A2O14975 620 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 ADCYAP1R1P41586 468 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 LRRC41Q15345 812 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 SEC23AQ15436 765 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 LRRC26Q2I0M4 334 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 RNF20Q5VTR2 975 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 CATIPQ7Z7H3 387 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 PURBQ96QR8 312 aaKnown RBP16.66■□□□□ 0.26
CAPN1-216ENST00000528739 SPC25Q9HBM1 224 aa16.66■□□□□ 0.26
CAPN1-216ENST00000528739 ADD3Q9UEY8 706 aaKnown RBP16.66■□□□□ 0.26
CAPN1-216ENST00000528739 COLQQ9Y215 455 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-216ENST00000528739 COL6A1P12109 1028 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 CCDC144BQ3MJ40 725 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 VTI1AQ96AJ9 217 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 FGD4Q96M96 766 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
CAPN1-216ENST00000528739 ATP11BQ9Y2G3 1177 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
CAPN1-216ENST00000528739 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.26
CAPN1-216ENST00000528739 PDE4DIPQ5VU43 2346 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 LAMA4Q16363 1823 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 PRC1O43663 620 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-216ENST00000528739 MCM5P33992 734 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
CAPN1-216ENST00000528739 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
CAPN1-216ENST00000528739 CCDC69A6NI79 296 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
CAPN1-216ENST00000528739 TNFAIP2Q03169 654 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
CAPN1-216ENST00000528739 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-216ENST00000528739 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-216ENST00000528739 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 MAD2L2Q9UI95 211 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
CAPN1-216ENST00000528739 ABCB11O95342 1321 aa16.63■□□□□ 0.25
CAPN1-216ENST00000528739 B4DLN1 442 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
CAPN1-216ENST00000528739 ALDH5A1P51649 535 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-216ENST00000528739 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
CAPN1-216ENST00000528739 ANTXR2P58335 489 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 RTP1P59025 263 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 PDE4DQ08499 809 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 GRM4Q14833 912 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 NECTIN1Q15223 517 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 MCF2L2Q86YR7 1114 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-216ENST00000528739 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 AP5M1Q9H0R1 490 aa16.62■□□□□ 0.25
CAPN1-216ENST00000528739 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-216ENST00000528739 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-216ENST00000528739 CFBP00751 764 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 KCNA10Q16322 511 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 TMTC2Q8N394 836 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 PRDM5Q9NQX1 630 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-216ENST00000528739 GPHNQ9NQX3 736 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-216ENST00000528739 PDGFCQ9NRA1 345 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 PLXNA1Q9UIW2 1896 aa16.61■□□□□ 0.25
CAPN1-216ENST00000528739 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-216ENST00000528739 IQSEC1Q6DN90 963 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 TBC1D5Q92609 795 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 NEK1Q96PY6 1258 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 PIGSQ96S52 555 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-216ENST00000528739 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 VTA1Q9NP79 307 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 STARD7Q9NQZ5 370 aa16.6■□□□□ 0.25
CAPN1-216ENST00000528739 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
CAPN1-216ENST00000528739 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms