RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
CHD7-208ENST00000528280 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
CHD7-208ENST00000528280 SGSM2O43147 1006 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
CHD7-208ENST00000528280 SLC16A2P36021 539 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
CHD7-208ENST00000528280 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 IQSEC1Q6DN90 963 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 TTBK2Q6IQ55 1244 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 SLC39A5Q6ZMH5 540 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 RALYLQ86SE5 291 aaKnown RBP11.23□□□□□ -0.61
CHD7-208ENST00000528280 PCSK9Q8NBP7 692 aaKnown RBP11.23□□□□□ -0.61
CHD7-208ENST00000528280 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 ZKSCAN3Q9BRR0 538 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 NEDD4P46934 1319 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
CHD7-208ENST00000528280 MOXD2PA6NHM9 499 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
CHD7-208ENST00000528280 PLA2G5P39877 138 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 ADCYAP1R1P41586 468 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 LRRC26Q2I0M4 334 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 ANO1Q5XXA6 986 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
CHD7-208ENST00000528280 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 ARMCX2Q7L311 632 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 CCDC144CPQ8IYA2 1237 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 TMTC2Q8N394 836 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 ENAHQ8N8S7 591 aaPredicted RBP11.22□□□□□ -0.61
CHD7-208ENST00000528280 LBHD1Q9BQE6 289 aaPredicted RBP11.22□□□□□ -0.61
CHD7-208ENST00000528280 MTA3Q9BTC8 594 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
CHD7-208ENST00000528280 ZMYND8Q9ULU4 1186 aaPredicted RBP11.22□□□□□ -0.61
CHD7-208ENST00000528280 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 Q9Y3F1 56 aa11.22□□□□□ -0.61
CHD7-208ENST00000528280 TNKSO95271 1327 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 ZEB2O60315 1214 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 TAL1P17542 331 aaPredicted RBP11.21□□□□□ -0.61
CHD7-208ENST00000528280 MAGEA10P43363 369 aaPredicted RBP11.21□□□□□ -0.61
CHD7-208ENST00000528280 SNAP25P60880 206 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 CNTN2Q02246 1040 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 RNF207Q6ZRF8 634 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 DNERQ8NFT8 737 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
CHD7-208ENST00000528280 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 RAPGEFL1Q9UHV5 662 aa11.21□□□□□ -0.61
CHD7-208ENST00000528280 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.62
CHD7-208ENST00000528280 MUC3AQ02505 3323 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 ABCB11O95342 1321 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 E7EWF7 191 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 IFIT3O14879 490 aaKnown RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 PGK1P00558 417 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 CYP21A2P08686 494 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 CST5P28325 142 aaPredicted RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 GJA9P57773 515 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 NKX3-2P78367 333 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 TNFAIP2Q03169 654 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 PTH1RQ03431 593 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 BAATQ14032 418 aaPredicted RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 GNASQ5JWF2 1037 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 NOL8Q76FK4 1167 aaKnown RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 ADGRF4Q8IZF3 695 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 SAMD3Q8N6K7 520 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 KLHDC9Q8NEP7 349 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 UBA5Q9GZZ9 404 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 VTA1Q9NP79 307 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 MAP3K20Q9NYL2 800 aaKnown RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 MRPL11Q9Y3B7 192 aaKnown RBP11.2□□□□□ -0.62
CHD7-208ENST00000528280 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
CHD7-208ENST00000528280 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 ELP1O95163 1332 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 PTPDC1A2A3K4 754 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
CHD7-208ENST00000528280 ADAMTS4O75173 837 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 CABYRO75952 493 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
CHD7-208ENST00000528280 GOLGA8HP0CJ92 632 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 ACLYP53396 1101 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 RTP1P59025 263 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 WTAPQ15007 396 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 SNX17Q15036 470 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 SEC23AQ15436 765 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 KCNA10Q16322 511 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 CATIPQ7Z7H3 387 aa11.19□□□□□ -0.62
CHD7-208ENST00000528280 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms