RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 MKL1Q969V6 931 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 KIFC2Q96AC6 838 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 RIPK3Q9Y572 518 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 PLS1Q14651 629 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 GPR142Q7Z601 462 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 ZNF654Q8IZM8 581 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 GMCL1P1Q8NEA9 526 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 GPRC5AQ8NFJ5 357 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 LPAR1Q92633 364 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 TTC14Q96N46 770 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
CCDC90B-210ENST00000528149 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 TMEM232C9JQI7 657 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 PDHBP11177 359 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 RXRAP19793 462 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 NEK4P51957 841 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 TOB2Q14106 344 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 COG2Q14746 738 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 SLC35G1Q2M3R5 365 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 USP6NLQ92738 828 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 BRF1Q92994 677 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 NECAB3Q96P71 396 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 C1QTNF1Q9BXJ1 281 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 RAVER2Q9HCJ3 691 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 HCN4Q9Y3Q4 1203 aa13.47□□□□□ -0.25
CCDC90B-210ENST00000528149 TCF20Q9UGU0 1960 aaKnown RBP13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 DNM1LO00429 736 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 VWA5AO00534 786 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 ERCC3P19447 782 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 DNAJB2P25686 324 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 LIFRP42702 1097 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 SLC1A4P43007 532 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 MORN1Q5T089 497 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 APOA5Q6Q788 366 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 CATIPQ7Z7H3 387 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 MICU3Q86XE3 530 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 DCAF4Q8WV16 495 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 APBA2Q99767 749 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 SLF1Q9BQI6 1058 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 SPATC1LQ9H0A9 340 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 PDLIM7Q9NR12 457 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 BRPF3Q9ULD4 1205 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 LCTP09848 1927 aa13.46□□□□□ -0.25
CCDC90B-210ENST00000528149 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.26
CCDC90B-210ENST00000528149 TRIM43BA6NCK2 446 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 GOLGA8BA8MQT2 603 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 COBLO75128 1261 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 DDAH1O94760 285 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 BMP3P12645 472 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 RGS2P41220 211 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 EPHB4P54760 987 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 AK2P54819 239 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 MRPS5P82675 430 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 RABEP1Q15276 862 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 TRIM43Q96BQ3 446 aaPredicted RBP13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 GMCL1Q96IK5 515 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 ADAMTS5Q9UNA0 930 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 SLC12A7Q9Y666 1083 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 ZNF236Q9UL36 1845 aa13.45□□□□□ -0.26
CCDC90B-210ENST00000528149 ZNF536O15090 1300 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 XIRP2A4UGR9 3374 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 PGK2P07205 417 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 SNHG28P0DPA3 235 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 TROAPQ12815 778 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 GRM4Q14833 912 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 PLEKHH3Q7Z736 793 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms